Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
TRGV5A0A0B4J1U4 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRGV5A0A0B4J1U4 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRGV5A0A0B4J1U4 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRGV5A0A0B4J1U4 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.13■□□□□ 0.33
TRGV5A0A0B4J1U4 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRGV5A0A0B4J1U4 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.12■□□□□ 0.33
TRGV5A0A0B4J1U4 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRGV5A0A0B4J1U4 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRGV5A0A0B4J1U4 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRGV5A0A0B4J1U4 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRGV5A0A0B4J1U4 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRGV5A0A0B4J1U4 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRGV5A0A0B4J1U4 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRGV5A0A0B4J1U4 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRGV5A0A0B4J1U4 AP000523.1-201ENST00000398242 1049 ntBASIC17.12■□□□□ 0.33
TRGV5A0A0B4J1U4 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.12■□□□□ 0.33
TRGV5A0A0B4J1U4 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.12■□□□□ 0.33
TRGV5A0A0B4J1U4 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.12■□□□□ 0.33
TRGV5A0A0B4J1U4 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.12■□□□□ 0.33
TRGV5A0A0B4J1U4 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.12■□□□□ 0.33
TRGV5A0A0B4J1U4 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.12■□□□□ 0.33
TRGV5A0A0B4J1U4 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.12■□□□□ 0.33
TRGV5A0A0B4J1U4 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.12■□□□□ 0.33
TRGV5A0A0B4J1U4 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRGV5A0A0B4J1U4 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRGV5A0A0B4J1U4 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.12■□□□□ 0.33
TRGV5A0A0B4J1U4 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.12■□□□□ 0.33
TRGV5A0A0B4J1U4 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.12■□□□□ 0.33
TRGV5A0A0B4J1U4 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRGV5A0A0B4J1U4 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRGV5A0A0B4J1U4 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRGV5A0A0B4J1U4 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TRGV5A0A0B4J1U4 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRGV5A0A0B4J1U4 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.12■□□□□ 0.33
TRGV5A0A0B4J1U4 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.12■□□□□ 0.33
TRGV5A0A0B4J1U4 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TRGV5A0A0B4J1U4 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
TRGV5A0A0B4J1U4 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.11■□□□□ 0.33
TRGV5A0A0B4J1U4 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRGV5A0A0B4J1U4 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRGV5A0A0B4J1U4 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.11■□□□□ 0.33
TRGV5A0A0B4J1U4 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRGV5A0A0B4J1U4 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRGV5A0A0B4J1U4 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRGV5A0A0B4J1U4 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRGV5A0A0B4J1U4 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRGV5A0A0B4J1U4 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRGV5A0A0B4J1U4 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRGV5A0A0B4J1U4 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRGV5A0A0B4J1U4 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
TRGV5A0A0B4J1U4 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.11■□□□□ 0.33
TRGV5A0A0B4J1U4 AC011558.1-201ENST00000623459 338 ntBASIC17.11■□□□□ 0.33
TRGV5A0A0B4J1U4 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRGV5A0A0B4J1U4 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.11■□□□□ 0.33
TRGV5A0A0B4J1U4 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRGV5A0A0B4J1U4 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRGV5A0A0B4J1U4 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.11■□□□□ 0.33
TRGV5A0A0B4J1U4 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.11■□□□□ 0.33
TRGV5A0A0B4J1U4 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRGV5A0A0B4J1U4 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRGV5A0A0B4J1U4 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRGV5A0A0B4J1U4 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.11■□□□□ 0.33
TRGV5A0A0B4J1U4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRGV5A0A0B4J1U4 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRGV5A0A0B4J1U4 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
TRGV5A0A0B4J1U4 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRGV5A0A0B4J1U4 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TRGV5A0A0B4J1U4 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRGV5A0A0B4J1U4 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRGV5A0A0B4J1U4 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRGV5A0A0B4J1U4 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRGV5A0A0B4J1U4 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRGV5A0A0B4J1U4 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
TRGV5A0A0B4J1U4 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRGV5A0A0B4J1U4 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
TRGV5A0A0B4J1U4 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRGV5A0A0B4J1U4 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.1■□□□□ 0.33
TRGV5A0A0B4J1U4 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRGV5A0A0B4J1U4 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.1■□□□□ 0.33
TRGV5A0A0B4J1U4 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.1■□□□□ 0.33
TRGV5A0A0B4J1U4 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRGV5A0A0B4J1U4 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRGV5A0A0B4J1U4 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.1■□□□□ 0.33
TRGV5A0A0B4J1U4 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRGV5A0A0B4J1U4 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRGV5A0A0B4J1U4 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.1■□□□□ 0.33
TRGV5A0A0B4J1U4 FAM8A6P-201ENST00000407496 1135 ntBASIC17.1■□□□□ 0.33
TRGV5A0A0B4J1U4 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRGV5A0A0B4J1U4 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
TRGV5A0A0B4J1U4 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.1■□□□□ 0.33
TRGV5A0A0B4J1U4 AL023973.1-201ENST00000624619 620 ntBASIC17.1■□□□□ 0.33
TRGV5A0A0B4J1U4 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRGV5A0A0B4J1U4 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRGV5A0A0B4J1U4 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TRGV5A0A0B4J1U4 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.1■□□□□ 0.33
TRGV5A0A0B4J1U4 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRGV5A0A0B4J1U4 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRGV5A0A0B4J1U4 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TRGV5A0A0B4J1U4 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms