Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 HLA-B-256ENST00000639848 1089 ntBASIC13.54□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 MYC-209ENST00000641252 345 ntBASIC13.54□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC13.54□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC13.54□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC13.54□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC13.53□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC13.53□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 APTR-205ENST00000447009 902 ntTSL 2 BASIC13.53□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC13.53□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC13.53□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC13.53□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC13.53□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 KRT8P20-201ENST00000423953 1409 ntBASIC13.53□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 GOLGA2P11-201ENST00000562660 1621 ntBASIC13.53□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC13.52□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV8-3A0A0A6YYJ7 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 GGT1-206ENST00000404223 952 ntTSL 2 BASIC13.52□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 GATS-209ENST00000454084 1030 ntTSL 3 BASIC13.52□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 AC060766.5-201ENST00000590539 871 ntBASIC13.52□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC13.52□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC13.52□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 PKD1P5-201ENST00000532415 10291 ntBASIC13.51□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC13.51□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC13.51□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC13.51□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 AC092368.3-202ENST00000574180 1591 ntBASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms