Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAI2Q9Y5P3 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAI2Q9Y5P3 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAI2Q9Y5P3 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.34■□□□□ 0.69
RAI2Q9Y5P3 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAI2Q9Y5P3 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAI2Q9Y5P3 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAI2Q9Y5P3 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.34■□□□□ 0.69
RAI2Q9Y5P3 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RAI2Q9Y5P3 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.34■□□□□ 0.69
RAI2Q9Y5P3 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAI2Q9Y5P3 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
RAI2Q9Y5P3 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RAI2Q9Y5P3 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.34■□□□□ 0.69
RAI2Q9Y5P3 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.34■□□□□ 0.69
RAI2Q9Y5P3 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.34■□□□□ 0.69
RAI2Q9Y5P3 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAI2Q9Y5P3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAI2Q9Y5P3 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAI2Q9Y5P3 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAI2Q9Y5P3 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RAI2Q9Y5P3 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.33■□□□□ 0.69
RAI2Q9Y5P3 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
RAI2Q9Y5P3 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
RAI2Q9Y5P3 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.33■□□□□ 0.69
RAI2Q9Y5P3 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
RAI2Q9Y5P3 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RAI2Q9Y5P3 AC141586.3-201ENST00000562166 1838 ntBASIC19.33■□□□□ 0.69
RAI2Q9Y5P3 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RAI2Q9Y5P3 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAI2Q9Y5P3 TSPY21P-201ENST00000433481 731 ntBASIC19.33■□□□□ 0.68
RAI2Q9Y5P3 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.68
RAI2Q9Y5P3 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
RAI2Q9Y5P3 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.33■□□□□ 0.68
RAI2Q9Y5P3 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.33■□□□□ 0.68
RAI2Q9Y5P3 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
RAI2Q9Y5P3 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.33■□□□□ 0.68
RAI2Q9Y5P3 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.33■□□□□ 0.68
RAI2Q9Y5P3 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RAI2Q9Y5P3 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAI2Q9Y5P3 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RAI2Q9Y5P3 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.33■□□□□ 0.68
RAI2Q9Y5P3 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.33■□□□□ 0.68
RAI2Q9Y5P3 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAI2Q9Y5P3 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
RAI2Q9Y5P3 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
RAI2Q9Y5P3 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAI2Q9Y5P3 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAI2Q9Y5P3 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.33■□□□□ 0.68
RAI2Q9Y5P3 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RAI2Q9Y5P3 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.32■□□□□ 0.68
RAI2Q9Y5P3 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RAI2Q9Y5P3 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAI2Q9Y5P3 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RAI2Q9Y5P3 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAI2Q9Y5P3 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.32■□□□□ 0.68
RAI2Q9Y5P3 TSPY23P-201ENST00000440136 739 ntBASIC19.32■□□□□ 0.68
RAI2Q9Y5P3 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
RAI2Q9Y5P3 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.32■□□□□ 0.68
RAI2Q9Y5P3 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.32■□□□□ 0.68
RAI2Q9Y5P3 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.32■□□□□ 0.68
RAI2Q9Y5P3 AP000692.2-201ENST00000608391 879 ntBASIC19.32■□□□□ 0.68
RAI2Q9Y5P3 DGCR10-201ENST00000609839 495 ntBASIC19.32■□□□□ 0.68
RAI2Q9Y5P3 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAI2Q9Y5P3 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.32■□□□□ 0.68
RAI2Q9Y5P3 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.32■□□□□ 0.68
RAI2Q9Y5P3 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAI2Q9Y5P3 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RAI2Q9Y5P3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RAI2Q9Y5P3 KRT8P11-201ENST00000409686 1436 ntBASIC19.32■□□□□ 0.68
RAI2Q9Y5P3 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAI2Q9Y5P3 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RAI2Q9Y5P3 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAI2Q9Y5P3 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAI2Q9Y5P3 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.32■□□□□ 0.68
RAI2Q9Y5P3 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAI2Q9Y5P3 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.31■□□□□ 0.68
RAI2Q9Y5P3 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.31■□□□□ 0.68
RAI2Q9Y5P3 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAI2Q9Y5P3 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.31■□□□□ 0.68
RAI2Q9Y5P3 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAI2Q9Y5P3 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAI2Q9Y5P3 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.31■□□□□ 0.68
RAI2Q9Y5P3 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAI2Q9Y5P3 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAI2Q9Y5P3 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAI2Q9Y5P3 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.31■□□□□ 0.68
RAI2Q9Y5P3 RBM17P1-201ENST00000453646 1190 ntBASIC19.31■□□□□ 0.68
RAI2Q9Y5P3 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.31■□□□□ 0.68
RAI2Q9Y5P3 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.31■□□□□ 0.68
RAI2Q9Y5P3 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.31■□□□□ 0.68
RAI2Q9Y5P3 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAI2Q9Y5P3 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAI2Q9Y5P3 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAI2Q9Y5P3 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.31■□□□□ 0.68
RAI2Q9Y5P3 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.31■□□□□ 0.68
RAI2Q9Y5P3 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAI2Q9Y5P3 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.31■□□□□ 0.68
RAI2Q9Y5P3 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RAI2Q9Y5P3 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms