Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VPS9D1Q9Y2B5 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VPS9D1Q9Y2B5 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19■□□□□ 0.63
VPS9D1Q9Y2B5 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
VPS9D1Q9Y2B5 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19■□□□□ 0.63
VPS9D1Q9Y2B5 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19■□□□□ 0.63
VPS9D1Q9Y2B5 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19■□□□□ 0.63
VPS9D1Q9Y2B5 RPPH1-201ENST00000516869 333 ntBASIC19■□□□□ 0.63
VPS9D1Q9Y2B5 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19■□□□□ 0.63
VPS9D1Q9Y2B5 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
VPS9D1Q9Y2B5 AC244517.3-201ENST00000616254 1235 ntBASIC19■□□□□ 0.63
VPS9D1Q9Y2B5 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19■□□□□ 0.63
VPS9D1Q9Y2B5 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19■□□□□ 0.63
VPS9D1Q9Y2B5 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VPS9D1Q9Y2B5 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19■□□□□ 0.63
VPS9D1Q9Y2B5 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
VPS9D1Q9Y2B5 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19■□□□□ 0.63
VPS9D1Q9Y2B5 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
VPS9D1Q9Y2B5 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VPS9D1Q9Y2B5 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19■□□□□ 0.63
VPS9D1Q9Y2B5 HTR7P1-201ENST00000538670 1336 ntBASIC19■□□□□ 0.63
VPS9D1Q9Y2B5 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VPS9D1Q9Y2B5 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
VPS9D1Q9Y2B5 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VPS9D1Q9Y2B5 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VPS9D1Q9Y2B5 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
VPS9D1Q9Y2B5 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.99■□□□□ 0.63
VPS9D1Q9Y2B5 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VPS9D1Q9Y2B5 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VPS9D1Q9Y2B5 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
VPS9D1Q9Y2B5 KRT18P29-201ENST00000397031 1267 ntBASIC18.99■□□□□ 0.63
VPS9D1Q9Y2B5 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VPS9D1Q9Y2B5 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
VPS9D1Q9Y2B5 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.99■□□□□ 0.63
VPS9D1Q9Y2B5 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
VPS9D1Q9Y2B5 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.99■□□□□ 0.63
VPS9D1Q9Y2B5 RARRES2P10-201ENST00000564312 460 ntBASIC18.99■□□□□ 0.63
VPS9D1Q9Y2B5 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VPS9D1Q9Y2B5 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VPS9D1Q9Y2B5 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VPS9D1Q9Y2B5 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VPS9D1Q9Y2B5 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VPS9D1Q9Y2B5 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VPS9D1Q9Y2B5 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VPS9D1Q9Y2B5 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
VPS9D1Q9Y2B5 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VPS9D1Q9Y2B5 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
VPS9D1Q9Y2B5 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VPS9D1Q9Y2B5 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.98■□□□□ 0.63
VPS9D1Q9Y2B5 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
VPS9D1Q9Y2B5 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VPS9D1Q9Y2B5 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VPS9D1Q9Y2B5 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VPS9D1Q9Y2B5 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VPS9D1Q9Y2B5 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.98■□□□□ 0.63
VPS9D1Q9Y2B5 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VPS9D1Q9Y2B5 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
VPS9D1Q9Y2B5 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VPS9D1Q9Y2B5 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VPS9D1Q9Y2B5 STK33P1-201ENST00000423835 1218 ntBASIC18.98■□□□□ 0.63
VPS9D1Q9Y2B5 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VPS9D1Q9Y2B5 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.98■□□□□ 0.63
VPS9D1Q9Y2B5 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.98■□□□□ 0.63
VPS9D1Q9Y2B5 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
VPS9D1Q9Y2B5 FAM197Y4-202ENST00000622692 608 ntBASIC18.98■□□□□ 0.63
VPS9D1Q9Y2B5 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
VPS9D1Q9Y2B5 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VPS9D1Q9Y2B5 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VPS9D1Q9Y2B5 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VPS9D1Q9Y2B5 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VPS9D1Q9Y2B5 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
VPS9D1Q9Y2B5 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
VPS9D1Q9Y2B5 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VPS9D1Q9Y2B5 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS9D1Q9Y2B5 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS9D1Q9Y2B5 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
VPS9D1Q9Y2B5 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS9D1Q9Y2B5 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
VPS9D1Q9Y2B5 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.97■□□□□ 0.63
VPS9D1Q9Y2B5 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS9D1Q9Y2B5 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.97■□□□□ 0.63
VPS9D1Q9Y2B5 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS9D1Q9Y2B5 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS9D1Q9Y2B5 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.97■□□□□ 0.63
VPS9D1Q9Y2B5 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
VPS9D1Q9Y2B5 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.97■□□□□ 0.63
VPS9D1Q9Y2B5 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
VPS9D1Q9Y2B5 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.97■□□□□ 0.63
VPS9D1Q9Y2B5 Z85996.1-201ENST00000494644 937 ntBASIC18.97■□□□□ 0.63
VPS9D1Q9Y2B5 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
VPS9D1Q9Y2B5 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.97■□□□□ 0.63
VPS9D1Q9Y2B5 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.97■□□□□ 0.63
VPS9D1Q9Y2B5 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.97■□□□□ 0.63
VPS9D1Q9Y2B5 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
VPS9D1Q9Y2B5 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.97■□□□□ 0.63
VPS9D1Q9Y2B5 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS9D1Q9Y2B5 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS9D1Q9Y2B5 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.97■□□□□ 0.63
VPS9D1Q9Y2B5 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS9D1Q9Y2B5 AL135905.2-201ENST00000584934 1404 ntBASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms