Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COMMD3Q9UBI1 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC16.82■□□□□ 0.28
COMMD3Q9UBI1 AP001330.3-201ENST00000520123 633 ntBASIC16.82■□□□□ 0.28
COMMD3Q9UBI1 SLC7A5P1-201ENST00000568957 537 ntBASIC16.82■□□□□ 0.28
COMMD3Q9UBI1 MIR6084-201ENST00000622012 110 ntBASIC16.82■□□□□ 0.28
COMMD3Q9UBI1 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.82■□□□□ 0.28
COMMD3Q9UBI1 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
COMMD3Q9UBI1 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
COMMD3Q9UBI1 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
COMMD3Q9UBI1 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
COMMD3Q9UBI1 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.82■□□□□ 0.28
COMMD3Q9UBI1 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.82■□□□□ 0.28
COMMD3Q9UBI1 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
COMMD3Q9UBI1 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COMMD3Q9UBI1 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COMMD3Q9UBI1 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
COMMD3Q9UBI1 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COMMD3Q9UBI1 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COMMD3Q9UBI1 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
COMMD3Q9UBI1 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
COMMD3Q9UBI1 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COMMD3Q9UBI1 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COMMD3Q9UBI1 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COMMD3Q9UBI1 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COMMD3Q9UBI1 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
COMMD3Q9UBI1 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.81■□□□□ 0.28
COMMD3Q9UBI1 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COMMD3Q9UBI1 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COMMD3Q9UBI1 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COMMD3Q9UBI1 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
COMMD3Q9UBI1 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
COMMD3Q9UBI1 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
COMMD3Q9UBI1 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
COMMD3Q9UBI1 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC16.81■□□□□ 0.28
COMMD3Q9UBI1 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
COMMD3Q9UBI1 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.81■□□□□ 0.28
COMMD3Q9UBI1 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.81■□□□□ 0.28
COMMD3Q9UBI1 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
COMMD3Q9UBI1 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COMMD3Q9UBI1 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
COMMD3Q9UBI1 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COMMD3Q9UBI1 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
COMMD3Q9UBI1 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COMMD3Q9UBI1 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COMMD3Q9UBI1 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.8■□□□□ 0.28
COMMD3Q9UBI1 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COMMD3Q9UBI1 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC16.8■□□□□ 0.28
COMMD3Q9UBI1 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
COMMD3Q9UBI1 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.8■□□□□ 0.28
COMMD3Q9UBI1 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COMMD3Q9UBI1 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COMMD3Q9UBI1 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COMMD3Q9UBI1 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COMMD3Q9UBI1 AC019069.1-201ENST00000610008 1333 ntBASIC16.8■□□□□ 0.28
COMMD3Q9UBI1 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
COMMD3Q9UBI1 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
COMMD3Q9UBI1 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COMMD3Q9UBI1 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
COMMD3Q9UBI1 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COMMD3Q9UBI1 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
COMMD3Q9UBI1 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC16.8■□□□□ 0.28
COMMD3Q9UBI1 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC16.8■□□□□ 0.28
COMMD3Q9UBI1 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC16.8■□□□□ 0.28
COMMD3Q9UBI1 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC16.8■□□□□ 0.28
COMMD3Q9UBI1 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC16.8■□□□□ 0.28
COMMD3Q9UBI1 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COMMD3Q9UBI1 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
COMMD3Q9UBI1 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.8■□□□□ 0.28
COMMD3Q9UBI1 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COMMD3Q9UBI1 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.28
COMMD3Q9UBI1 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COMMD3Q9UBI1 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.8■□□□□ 0.28
COMMD3Q9UBI1 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.8■□□□□ 0.28
COMMD3Q9UBI1 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COMMD3Q9UBI1 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COMMD3Q9UBI1 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
COMMD3Q9UBI1 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
COMMD3Q9UBI1 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.79■□□□□ 0.28
COMMD3Q9UBI1 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
COMMD3Q9UBI1 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
COMMD3Q9UBI1 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.79■□□□□ 0.28
COMMD3Q9UBI1 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
COMMD3Q9UBI1 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.79■□□□□ 0.28
COMMD3Q9UBI1 ZNF815P-204ENST00000434898 1737 ntBASIC16.79■□□□□ 0.28
COMMD3Q9UBI1 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
COMMD3Q9UBI1 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
COMMD3Q9UBI1 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC16.79■□□□□ 0.28
COMMD3Q9UBI1 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
COMMD3Q9UBI1 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
COMMD3Q9UBI1 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COMMD3Q9UBI1 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
COMMD3Q9UBI1 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
COMMD3Q9UBI1 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.79■□□□□ 0.28
COMMD3Q9UBI1 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COMMD3Q9UBI1 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COMMD3Q9UBI1 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
COMMD3Q9UBI1 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC16.79■□□□□ 0.28
COMMD3Q9UBI1 CASP6-205ENST00000505486 538 ntTSL 4 BASIC16.79■□□□□ 0.28
COMMD3Q9UBI1 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC16.79■□□□□ 0.28
COMMD3Q9UBI1 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms