Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.94■□□□□ 0.62
NCDNQ9UBB6 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.94■□□□□ 0.62
NCDNQ9UBB6 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.94■□□□□ 0.62
NCDNQ9UBB6 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
NCDNQ9UBB6 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
NCDNQ9UBB6 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.94■□□□□ 0.62
NCDNQ9UBB6 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NCDNQ9UBB6 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.94■□□□□ 0.62
NCDNQ9UBB6 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.94■□□□□ 0.62
NCDNQ9UBB6 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NCDNQ9UBB6 MIR1233-2-201ENST00000408138 82 ntBASIC18.94■□□□□ 0.62
NCDNQ9UBB6 MIR1233-1-201ENST00000408722 82 ntBASIC18.94■□□□□ 0.62
NCDNQ9UBB6 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NCDNQ9UBB6 KRT18P31-201ENST00000506277 1292 ntBASIC18.94■□□□□ 0.62
NCDNQ9UBB6 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.94■□□□□ 0.62
NCDNQ9UBB6 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
NCDNQ9UBB6 AL671883.3-201ENST00000603274 991 ntBASIC18.94■□□□□ 0.62
NCDNQ9UBB6 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
NCDNQ9UBB6 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NCDNQ9UBB6 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NCDNQ9UBB6 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.94■□□□□ 0.62
NCDNQ9UBB6 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
NCDNQ9UBB6 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NCDNQ9UBB6 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NCDNQ9UBB6 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
NCDNQ9UBB6 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
NCDNQ9UBB6 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.94■□□□□ 0.62
NCDNQ9UBB6 AL121603.2-201ENST00000557373 2117 ntBASIC18.94■□□□□ 0.62
NCDNQ9UBB6 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
NCDNQ9UBB6 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.93■□□□□ 0.62
NCDNQ9UBB6 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NCDNQ9UBB6 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NCDNQ9UBB6 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NCDNQ9UBB6 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.93■□□□□ 0.62
NCDNQ9UBB6 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.93■□□□□ 0.62
NCDNQ9UBB6 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NCDNQ9UBB6 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.93■□□□□ 0.62
NCDNQ9UBB6 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NCDNQ9UBB6 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NCDNQ9UBB6 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
NCDNQ9UBB6 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.93■□□□□ 0.62
NCDNQ9UBB6 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NCDNQ9UBB6 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NCDNQ9UBB6 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NCDNQ9UBB6 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NCDNQ9UBB6 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NCDNQ9UBB6 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NCDNQ9UBB6 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NCDNQ9UBB6 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.93■□□□□ 0.62
NCDNQ9UBB6 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
NCDNQ9UBB6 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NCDNQ9UBB6 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.93■□□□□ 0.62
NCDNQ9UBB6 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.93■□□□□ 0.62
NCDNQ9UBB6 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.93■□□□□ 0.62
NCDNQ9UBB6 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.93■□□□□ 0.62
NCDNQ9UBB6 AL121912.1-201ENST00000603683 238 ntBASIC18.93■□□□□ 0.62
NCDNQ9UBB6 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC18.93■□□□□ 0.62
NCDNQ9UBB6 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.93■□□□□ 0.62
NCDNQ9UBB6 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NCDNQ9UBB6 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NCDNQ9UBB6 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NCDNQ9UBB6 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.93■□□□□ 0.62
NCDNQ9UBB6 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NCDNQ9UBB6 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NCDNQ9UBB6 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.93■□□□□ 0.62
NCDNQ9UBB6 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
NCDNQ9UBB6 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NCDNQ9UBB6 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
NCDNQ9UBB6 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
NCDNQ9UBB6 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NCDNQ9UBB6 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NCDNQ9UBB6 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.92■□□□□ 0.62
NCDNQ9UBB6 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
NCDNQ9UBB6 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NCDNQ9UBB6 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.92■□□□□ 0.62
NCDNQ9UBB6 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NCDNQ9UBB6 MRPL3P1-201ENST00000400109 1033 ntBASIC18.92■□□□□ 0.62
NCDNQ9UBB6 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.92■□□□□ 0.62
NCDNQ9UBB6 AC092865.5-201ENST00000545435 363 ntBASIC18.92■□□□□ 0.62
NCDNQ9UBB6 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NCDNQ9UBB6 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
NCDNQ9UBB6 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NCDNQ9UBB6 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NCDNQ9UBB6 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.92■□□□□ 0.62
NCDNQ9UBB6 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NCDNQ9UBB6 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NCDNQ9UBB6 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NCDNQ9UBB6 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.92■□□□□ 0.62
NCDNQ9UBB6 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
NCDNQ9UBB6 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NCDNQ9UBB6 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NCDNQ9UBB6 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.91■□□□□ 0.62
NCDNQ9UBB6 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
NCDNQ9UBB6 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
NCDNQ9UBB6 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
NCDNQ9UBB6 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NCDNQ9UBB6 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NCDNQ9UBB6 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.91■□□□□ 0.62
NCDNQ9UBB6 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NCDNQ9UBB6 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 218.7 ms