Protein–RNA interactions for Protein: Q9NST1

PNPLA3, Patatin-like phospholipase domain-containing protein 3, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNPLA3Q9NST1 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.31■□□□□ 0.52
PNPLA3Q9NST1 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PNPLA3Q9NST1 AC090164.3-201ENST00000610780 2143 ntBASIC18.31■□□□□ 0.52
PNPLA3Q9NST1 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.31■□□□□ 0.52
PNPLA3Q9NST1 AC009237.14-201ENST00000609975 1594 ntBASIC18.31■□□□□ 0.52
PNPLA3Q9NST1 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PNPLA3Q9NST1 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PNPLA3Q9NST1 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PNPLA3Q9NST1 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PNPLA3Q9NST1 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.31■□□□□ 0.52
PNPLA3Q9NST1 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PNPLA3Q9NST1 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PNPLA3Q9NST1 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
PNPLA3Q9NST1 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.31■□□□□ 0.52
PNPLA3Q9NST1 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.31■□□□□ 0.52
PNPLA3Q9NST1 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.31■□□□□ 0.52
PNPLA3Q9NST1 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PNPLA3Q9NST1 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PNPLA3Q9NST1 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PNPLA3Q9NST1 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
PNPLA3Q9NST1 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PNPLA3Q9NST1 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.31■□□□□ 0.52
PNPLA3Q9NST1 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PNPLA3Q9NST1 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.31■□□□□ 0.52
PNPLA3Q9NST1 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.31■□□□□ 0.52
PNPLA3Q9NST1 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
PNPLA3Q9NST1 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PNPLA3Q9NST1 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.3■□□□□ 0.52
PNPLA3Q9NST1 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PNPLA3Q9NST1 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PNPLA3Q9NST1 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PNPLA3Q9NST1 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PNPLA3Q9NST1 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PNPLA3Q9NST1 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PNPLA3Q9NST1 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.3■□□□□ 0.52
PNPLA3Q9NST1 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.3■□□□□ 0.52
PNPLA3Q9NST1 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PNPLA3Q9NST1 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PNPLA3Q9NST1 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.3■□□□□ 0.52
PNPLA3Q9NST1 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PNPLA3Q9NST1 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PNPLA3Q9NST1 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.3■□□□□ 0.52
PNPLA3Q9NST1 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
PNPLA3Q9NST1 PGM5P4-201ENST00000421970 445 ntBASIC18.3■□□□□ 0.52
PNPLA3Q9NST1 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.3■□□□□ 0.52
PNPLA3Q9NST1 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.3■□□□□ 0.52
PNPLA3Q9NST1 C1QBPP2-201ENST00000528754 825 ntBASIC18.3■□□□□ 0.52
PNPLA3Q9NST1 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.3■□□□□ 0.52
PNPLA3Q9NST1 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.3■□□□□ 0.52
PNPLA3Q9NST1 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PNPLA3Q9NST1 AC233263.1-201ENST00000578059 224 ntBASIC18.3■□□□□ 0.52
PNPLA3Q9NST1 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.3■□□□□ 0.52
PNPLA3Q9NST1 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PNPLA3Q9NST1 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PNPLA3Q9NST1 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PNPLA3Q9NST1 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PNPLA3Q9NST1 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PNPLA3Q9NST1 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
PNPLA3Q9NST1 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
PNPLA3Q9NST1 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.3■□□□□ 0.52
PNPLA3Q9NST1 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PNPLA3Q9NST1 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PNPLA3Q9NST1 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PNPLA3Q9NST1 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PNPLA3Q9NST1 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PNPLA3Q9NST1 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.29■□□□□ 0.52
PNPLA3Q9NST1 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PNPLA3Q9NST1 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PNPLA3Q9NST1 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PNPLA3Q9NST1 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PNPLA3Q9NST1 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.29■□□□□ 0.52
PNPLA3Q9NST1 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.29■□□□□ 0.52
PNPLA3Q9NST1 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
PNPLA3Q9NST1 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.29■□□□□ 0.52
PNPLA3Q9NST1 NOC2LP1-202ENST00000452600 2235 ntBASIC18.29■□□□□ 0.52
PNPLA3Q9NST1 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.29■□□□□ 0.52
PNPLA3Q9NST1 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PNPLA3Q9NST1 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PNPLA3Q9NST1 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
PNPLA3Q9NST1 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PNPLA3Q9NST1 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.29■□□□□ 0.52
PNPLA3Q9NST1 RPS2P4-201ENST00000476944 856 ntBASIC18.29■□□□□ 0.52
PNPLA3Q9NST1 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.29■□□□□ 0.52
PNPLA3Q9NST1 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.29■□□□□ 0.52
PNPLA3Q9NST1 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PNPLA3Q9NST1 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.29■□□□□ 0.52
PNPLA3Q9NST1 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.29■□□□□ 0.52
PNPLA3Q9NST1 AL356652.1-201ENST00000615962 565 ntBASIC18.29■□□□□ 0.52
PNPLA3Q9NST1 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PNPLA3Q9NST1 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.29■□□□□ 0.52
PNPLA3Q9NST1 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.29■□□□□ 0.52
PNPLA3Q9NST1 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.29■□□□□ 0.52
PNPLA3Q9NST1 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PNPLA3Q9NST1 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PNPLA3Q9NST1 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PNPLA3Q9NST1 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PNPLA3Q9NST1 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.29■□□□□ 0.52
PNPLA3Q9NST1 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.29■□□□□ 0.52
PNPLA3Q9NST1 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PNPLA3Q9NST1 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms