Protein–RNA interactions for Protein: Q9HBF4

ZFYVE1, Zinc finger FYVE domain-containing protein 1, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE1Q9HBF4 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
ZFYVE1Q9HBF4 TSPY23P-201ENST00000440136 739 ntBASIC19.15■□□□□ 0.66
ZFYVE1Q9HBF4 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
ZFYVE1Q9HBF4 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.15■□□□□ 0.66
ZFYVE1Q9HBF4 AL355075.4-201ENST00000554988 638 ntBASIC19.15■□□□□ 0.66
ZFYVE1Q9HBF4 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.15■□□□□ 0.66
ZFYVE1Q9HBF4 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.15■□□□□ 0.66
ZFYVE1Q9HBF4 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.15■□□□□ 0.66
ZFYVE1Q9HBF4 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.15■□□□□ 0.66
ZFYVE1Q9HBF4 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.15■□□□□ 0.66
ZFYVE1Q9HBF4 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
ZFYVE1Q9HBF4 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZFYVE1Q9HBF4 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZFYVE1Q9HBF4 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZFYVE1Q9HBF4 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
ZFYVE1Q9HBF4 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.14■□□□□ 0.66
ZFYVE1Q9HBF4 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZFYVE1Q9HBF4 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.14■□□□□ 0.65
ZFYVE1Q9HBF4 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZFYVE1Q9HBF4 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.14■□□□□ 0.65
ZFYVE1Q9HBF4 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ZFYVE1Q9HBF4 RBM17P1-201ENST00000453646 1190 ntBASIC19.14■□□□□ 0.65
ZFYVE1Q9HBF4 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.14■□□□□ 0.65
ZFYVE1Q9HBF4 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.14■□□□□ 0.65
ZFYVE1Q9HBF4 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.14■□□□□ 0.65
ZFYVE1Q9HBF4 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.14■□□□□ 0.65
ZFYVE1Q9HBF4 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.14■□□□□ 0.65
ZFYVE1Q9HBF4 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.14■□□□□ 0.65
ZFYVE1Q9HBF4 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.14■□□□□ 0.65
ZFYVE1Q9HBF4 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.14■□□□□ 0.65
ZFYVE1Q9HBF4 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZFYVE1Q9HBF4 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.14■□□□□ 0.65
ZFYVE1Q9HBF4 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ZFYVE1Q9HBF4 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZFYVE1Q9HBF4 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ZFYVE1Q9HBF4 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.14■□□□□ 0.65
ZFYVE1Q9HBF4 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZFYVE1Q9HBF4 KRT8P11-201ENST00000409686 1436 ntBASIC19.14■□□□□ 0.65
ZFYVE1Q9HBF4 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZFYVE1Q9HBF4 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZFYVE1Q9HBF4 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ZFYVE1Q9HBF4 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
ZFYVE1Q9HBF4 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.14■□□□□ 0.65
ZFYVE1Q9HBF4 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZFYVE1Q9HBF4 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
ZFYVE1Q9HBF4 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZFYVE1Q9HBF4 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZFYVE1Q9HBF4 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
ZFYVE1Q9HBF4 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.14■□□□□ 0.65
ZFYVE1Q9HBF4 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
ZFYVE1Q9HBF4 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZFYVE1Q9HBF4 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.13■□□□□ 0.65
ZFYVE1Q9HBF4 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZFYVE1Q9HBF4 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZFYVE1Q9HBF4 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ZFYVE1Q9HBF4 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
ZFYVE1Q9HBF4 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
ZFYVE1Q9HBF4 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ZFYVE1Q9HBF4 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
ZFYVE1Q9HBF4 PRSS44-201ENST00000515154 1146 ntBASIC19.13■□□□□ 0.65
ZFYVE1Q9HBF4 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ZFYVE1Q9HBF4 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.13■□□□□ 0.65
ZFYVE1Q9HBF4 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
ZFYVE1Q9HBF4 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.13■□□□□ 0.65
ZFYVE1Q9HBF4 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.13■□□□□ 0.65
ZFYVE1Q9HBF4 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZFYVE1Q9HBF4 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ZFYVE1Q9HBF4 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZFYVE1Q9HBF4 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
ZFYVE1Q9HBF4 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ZFYVE1Q9HBF4 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZFYVE1Q9HBF4 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.13■□□□□ 0.65
ZFYVE1Q9HBF4 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZFYVE1Q9HBF4 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZFYVE1Q9HBF4 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZFYVE1Q9HBF4 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZFYVE1Q9HBF4 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZFYVE1Q9HBF4 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
ZFYVE1Q9HBF4 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
ZFYVE1Q9HBF4 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.12■□□□□ 0.65
ZFYVE1Q9HBF4 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.12■□□□□ 0.65
ZFYVE1Q9HBF4 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
ZFYVE1Q9HBF4 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZFYVE1Q9HBF4 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZFYVE1Q9HBF4 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.12■□□□□ 0.65
ZFYVE1Q9HBF4 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.12■□□□□ 0.65
ZFYVE1Q9HBF4 AC097488.1-201ENST00000507834 756 ntBASIC19.12■□□□□ 0.65
ZFYVE1Q9HBF4 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.12■□□□□ 0.65
ZFYVE1Q9HBF4 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ZFYVE1Q9HBF4 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ZFYVE1Q9HBF4 SLC25A1P4-201ENST00000567977 778 ntBASIC19.12■□□□□ 0.65
ZFYVE1Q9HBF4 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.12■□□□□ 0.65
ZFYVE1Q9HBF4 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.12■□□□□ 0.65
ZFYVE1Q9HBF4 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.12■□□□□ 0.65
ZFYVE1Q9HBF4 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ZFYVE1Q9HBF4 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZFYVE1Q9HBF4 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZFYVE1Q9HBF4 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
ZFYVE1Q9HBF4 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZFYVE1Q9HBF4 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms