Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VCX3BQ9H321 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
VCX3BQ9H321 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VCX3BQ9H321 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
VCX3BQ9H321 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
VCX3BQ9H321 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.2■□□□□ 0.5
VCX3BQ9H321 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.2■□□□□ 0.5
VCX3BQ9H321 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.2■□□□□ 0.5
VCX3BQ9H321 AC105233.4-201ENST00000642045 216 ntBASIC18.2■□□□□ 0.5
VCX3BQ9H321 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
VCX3BQ9H321 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VCX3BQ9H321 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VCX3BQ9H321 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VCX3BQ9H321 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.2■□□□□ 0.5
VCX3BQ9H321 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.2■□□□□ 0.5
VCX3BQ9H321 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.2■□□□□ 0.5
VCX3BQ9H321 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VCX3BQ9H321 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VCX3BQ9H321 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
VCX3BQ9H321 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VCX3BQ9H321 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VCX3BQ9H321 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.19■□□□□ 0.5
VCX3BQ9H321 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VCX3BQ9H321 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.19■□□□□ 0.5
VCX3BQ9H321 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
VCX3BQ9H321 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.19■□□□□ 0.5
VCX3BQ9H321 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VCX3BQ9H321 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
VCX3BQ9H321 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VCX3BQ9H321 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
VCX3BQ9H321 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.19■□□□□ 0.5
VCX3BQ9H321 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VCX3BQ9H321 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
VCX3BQ9H321 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
VCX3BQ9H321 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.19■□□□□ 0.5
VCX3BQ9H321 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.19■□□□□ 0.5
VCX3BQ9H321 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.19■□□□□ 0.5
VCX3BQ9H321 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
VCX3BQ9H321 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
VCX3BQ9H321 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
VCX3BQ9H321 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC18.19■□□□□ 0.5
VCX3BQ9H321 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VCX3BQ9H321 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.19■□□□□ 0.5
VCX3BQ9H321 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VCX3BQ9H321 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
VCX3BQ9H321 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.19■□□□□ 0.5
VCX3BQ9H321 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.19■□□□□ 0.5
VCX3BQ9H321 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.19■□□□□ 0.5
VCX3BQ9H321 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
VCX3BQ9H321 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.18■□□□□ 0.5
VCX3BQ9H321 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
VCX3BQ9H321 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VCX3BQ9H321 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VCX3BQ9H321 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
VCX3BQ9H321 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VCX3BQ9H321 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VCX3BQ9H321 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.18■□□□□ 0.5
VCX3BQ9H321 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.18■□□□□ 0.5
VCX3BQ9H321 IGHV3-19-201ENST00000521488 291 ntBASIC18.18■□□□□ 0.5
VCX3BQ9H321 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
VCX3BQ9H321 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
VCX3BQ9H321 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.18■□□□□ 0.5
VCX3BQ9H321 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VCX3BQ9H321 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
VCX3BQ9H321 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.18■□□□□ 0.5
VCX3BQ9H321 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
VCX3BQ9H321 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
VCX3BQ9H321 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.18■□□□□ 0.5
VCX3BQ9H321 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.18■□□□□ 0.5
VCX3BQ9H321 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
VCX3BQ9H321 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
VCX3BQ9H321 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VCX3BQ9H321 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VCX3BQ9H321 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.18■□□□□ 0.5
VCX3BQ9H321 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.18■□□□□ 0.5
VCX3BQ9H321 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
VCX3BQ9H321 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
VCX3BQ9H321 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.18■□□□□ 0.5
VCX3BQ9H321 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VCX3BQ9H321 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.17■□□□□ 0.5
VCX3BQ9H321 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
VCX3BQ9H321 AC073592.3-201ENST00000625118 1834 ntBASIC18.17■□□□□ 0.5
VCX3BQ9H321 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
VCX3BQ9H321 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VCX3BQ9H321 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VCX3BQ9H321 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
VCX3BQ9H321 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.17■□□□□ 0.5
VCX3BQ9H321 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VCX3BQ9H321 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.17■□□□□ 0.5
VCX3BQ9H321 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
VCX3BQ9H321 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.17■□□□□ 0.5
VCX3BQ9H321 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.17■□□□□ 0.5
VCX3BQ9H321 AL031963.3-201ENST00000606441 850 ntBASIC18.17■□□□□ 0.5
VCX3BQ9H321 AL356652.1-201ENST00000615962 565 ntBASIC18.17■□□□□ 0.5
VCX3BQ9H321 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VCX3BQ9H321 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.17■□□□□ 0.5
VCX3BQ9H321 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
VCX3BQ9H321 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
VCX3BQ9H321 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VCX3BQ9H321 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms