Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.2■□□□□ 0.66
CLPBQ9H078 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.2■□□□□ 0.66
CLPBQ9H078 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLPBQ9H078 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
CLPBQ9H078 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.2■□□□□ 0.66
CLPBQ9H078 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CLPBQ9H078 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CLPBQ9H078 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLPBQ9H078 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLPBQ9H078 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLPBQ9H078 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CLPBQ9H078 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLPBQ9H078 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.19■□□□□ 0.66
CLPBQ9H078 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLPBQ9H078 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLPBQ9H078 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.19■□□□□ 0.66
CLPBQ9H078 AL032819.2-201ENST00000624543 2162 ntBASIC19.19■□□□□ 0.66
CLPBQ9H078 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLPBQ9H078 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLPBQ9H078 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.19■□□□□ 0.66
CLPBQ9H078 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.19■□□□□ 0.66
CLPBQ9H078 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLPBQ9H078 AC004980.1-204ENST00000429707 299 ntBASIC19.19■□□□□ 0.66
CLPBQ9H078 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.19■□□□□ 0.66
CLPBQ9H078 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLPBQ9H078 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.19■□□□□ 0.66
CLPBQ9H078 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.19■□□□□ 0.66
CLPBQ9H078 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.19■□□□□ 0.66
CLPBQ9H078 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.19■□□□□ 0.66
CLPBQ9H078 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CLPBQ9H078 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLPBQ9H078 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLPBQ9H078 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.19■□□□□ 0.66
CLPBQ9H078 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CLPBQ9H078 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.19■□□□□ 0.66
CLPBQ9H078 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLPBQ9H078 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.19■□□□□ 0.66
CLPBQ9H078 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.19■□□□□ 0.66
CLPBQ9H078 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
CLPBQ9H078 AC120498.9-201ENST00000339021 3867 ntBASIC19.19■□□□□ 0.66
CLPBQ9H078 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
CLPBQ9H078 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.19■□□□□ 0.66
CLPBQ9H078 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CLPBQ9H078 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLPBQ9H078 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.18■□□□□ 0.66
CLPBQ9H078 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CLPBQ9H078 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLPBQ9H078 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLPBQ9H078 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLPBQ9H078 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.18■□□□□ 0.66
CLPBQ9H078 AC011506.1-201ENST00000474329 610 ntBASIC19.18■□□□□ 0.66
CLPBQ9H078 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLPBQ9H078 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.18■□□□□ 0.66
CLPBQ9H078 AC010947.1-201ENST00000623454 693 ntBASIC19.18■□□□□ 0.66
CLPBQ9H078 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.18■□□□□ 0.66
CLPBQ9H078 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLPBQ9H078 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLPBQ9H078 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CLPBQ9H078 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLPBQ9H078 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLPBQ9H078 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLPBQ9H078 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLPBQ9H078 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLPBQ9H078 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLPBQ9H078 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
CLPBQ9H078 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.17■□□□□ 0.66
CLPBQ9H078 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLPBQ9H078 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CLPBQ9H078 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
CLPBQ9H078 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLPBQ9H078 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLPBQ9H078 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CLPBQ9H078 FSCN1P1-201ENST00000568912 1481 ntBASIC19.17■□□□□ 0.66
CLPBQ9H078 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CLPBQ9H078 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLPBQ9H078 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.17■□□□□ 0.66
CLPBQ9H078 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLPBQ9H078 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLPBQ9H078 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLPBQ9H078 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLPBQ9H078 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
CLPBQ9H078 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLPBQ9H078 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CLPBQ9H078 B3GAT3P1-201ENST00000471720 806 ntBASIC19.17■□□□□ 0.66
CLPBQ9H078 AC026271.3-201ENST00000571884 352 ntBASIC19.17■□□□□ 0.66
CLPBQ9H078 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.17■□□□□ 0.66
CLPBQ9H078 RN7SL850P-201ENST00000579959 291 ntBASIC19.17■□□□□ 0.66
CLPBQ9H078 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLPBQ9H078 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.17■□□□□ 0.66
CLPBQ9H078 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
CLPBQ9H078 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
CLPBQ9H078 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLPBQ9H078 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLPBQ9H078 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.17■□□□□ 0.66
CLPBQ9H078 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLPBQ9H078 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.17■□□□□ 0.66
CLPBQ9H078 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLPBQ9H078 LINC01568-207ENST00000641790 1380 ntBASIC19.17■□□□□ 0.66
CLPBQ9H078 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLPBQ9H078 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms