Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.69■□□□□ 0.58
NPAS2Q99743 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPAS2Q99743 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPAS2Q99743 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NPAS2Q99743 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPAS2Q99743 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NPAS2Q99743 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NPAS2Q99743 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPAS2Q99743 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.69■□□□□ 0.58
NPAS2Q99743 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPAS2Q99743 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
NPAS2Q99743 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPAS2Q99743 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
NPAS2Q99743 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.68■□□□□ 0.58
NPAS2Q99743 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NPAS2Q99743 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.68■□□□□ 0.58
NPAS2Q99743 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPAS2Q99743 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
NPAS2Q99743 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
NPAS2Q99743 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPAS2Q99743 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.68■□□□□ 0.58
NPAS2Q99743 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.68■□□□□ 0.58
NPAS2Q99743 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPAS2Q99743 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
NPAS2Q99743 AC141586.3-201ENST00000562166 1838 ntBASIC18.68■□□□□ 0.58
NPAS2Q99743 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPAS2Q99743 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPAS2Q99743 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPAS2Q99743 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.68■□□□□ 0.58
NPAS2Q99743 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
NPAS2Q99743 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NPAS2Q99743 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.68■□□□□ 0.58
NPAS2Q99743 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NPAS2Q99743 AC069544.1-201ENST00000609399 999 ntBASIC18.68■□□□□ 0.58
NPAS2Q99743 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPAS2Q99743 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPAS2Q99743 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPAS2Q99743 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.68■□□□□ 0.58
NPAS2Q99743 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.68■□□□□ 0.58
NPAS2Q99743 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.68■□□□□ 0.58
NPAS2Q99743 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.68■□□□□ 0.58
NPAS2Q99743 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPAS2Q99743 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NPAS2Q99743 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPAS2Q99743 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPAS2Q99743 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPAS2Q99743 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPAS2Q99743 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPAS2Q99743 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.68■□□□□ 0.58
NPAS2Q99743 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPAS2Q99743 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.68■□□□□ 0.58
NPAS2Q99743 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.68■□□□□ 0.58
NPAS2Q99743 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NPAS2Q99743 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
NPAS2Q99743 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPAS2Q99743 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPAS2Q99743 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.67■□□□□ 0.58
NPAS2Q99743 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPAS2Q99743 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
NPAS2Q99743 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NPAS2Q99743 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPAS2Q99743 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPAS2Q99743 AC138932.1-201ENST00000534164 6830 ntBASIC18.67■□□□□ 0.58
NPAS2Q99743 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NPAS2Q99743 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
NPAS2Q99743 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPAS2Q99743 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPAS2Q99743 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NPAS2Q99743 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NPAS2Q99743 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.67■□□□□ 0.58
NPAS2Q99743 KRT17P3-201ENST00000420566 1262 ntBASIC18.67■□□□□ 0.58
NPAS2Q99743 POM121L13P-201ENST00000422362 380 ntBASIC18.67■□□□□ 0.58
NPAS2Q99743 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
NPAS2Q99743 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.67■□□□□ 0.58
NPAS2Q99743 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.67■□□□□ 0.58
NPAS2Q99743 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NPAS2Q99743 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
NPAS2Q99743 AL359736.2-201ENST00000621992 437 ntBASIC18.67■□□□□ 0.58
NPAS2Q99743 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPAS2Q99743 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPAS2Q99743 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.67■□□□□ 0.58
NPAS2Q99743 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.67■□□□□ 0.58
NPAS2Q99743 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPAS2Q99743 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPAS2Q99743 AL390961.4-201ENST00000623958 2535 ntBASIC18.67■□□□□ 0.58
NPAS2Q99743 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
NPAS2Q99743 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NPAS2Q99743 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPAS2Q99743 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
NPAS2Q99743 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.67■□□□□ 0.58
NPAS2Q99743 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.67■□□□□ 0.58
NPAS2Q99743 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPAS2Q99743 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
NPAS2Q99743 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.66■□□□□ 0.58
NPAS2Q99743 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NPAS2Q99743 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NPAS2Q99743 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.66■□□□□ 0.58
NPAS2Q99743 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NPAS2Q99743 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NPAS2Q99743 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms