Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
GFI1Q99684 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.5■□□□□ 0.23
GFI1Q99684 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
GFI1Q99684 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
GFI1Q99684 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GFI1Q99684 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GFI1Q99684 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.49■□□□□ 0.23
GFI1Q99684 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
GFI1Q99684 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GFI1Q99684 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
GFI1Q99684 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GFI1Q99684 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GFI1Q99684 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
GFI1Q99684 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC16.49■□□□□ 0.23
GFI1Q99684 AL390719.1-204ENST00000412397 1219 ntBASIC16.49■□□□□ 0.23
GFI1Q99684 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.49■□□□□ 0.23
GFI1Q99684 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC16.49■□□□□ 0.23
GFI1Q99684 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GFI1Q99684 RPS2P52-201ENST00000469610 820 ntBASIC16.49■□□□□ 0.23
GFI1Q99684 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
GFI1Q99684 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
GFI1Q99684 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC16.49■□□□□ 0.23
GFI1Q99684 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.49■□□□□ 0.23
GFI1Q99684 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GFI1Q99684 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
GFI1Q99684 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.49■□□□□ 0.23
GFI1Q99684 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
GFI1Q99684 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GFI1Q99684 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GFI1Q99684 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.49■□□□□ 0.23
GFI1Q99684 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.49■□□□□ 0.23
GFI1Q99684 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GFI1Q99684 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
GFI1Q99684 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.49■□□□□ 0.23
GFI1Q99684 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
GFI1Q99684 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.48■□□□□ 0.23
GFI1Q99684 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
GFI1Q99684 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
GFI1Q99684 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GFI1Q99684 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
GFI1Q99684 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
GFI1Q99684 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GFI1Q99684 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GFI1Q99684 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.48■□□□□ 0.23
GFI1Q99684 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GFI1Q99684 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.48■□□□□ 0.23
GFI1Q99684 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GFI1Q99684 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
GFI1Q99684 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.48■□□□□ 0.23
GFI1Q99684 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
GFI1Q99684 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.48■□□□□ 0.23
GFI1Q99684 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC16.48■□□□□ 0.23
GFI1Q99684 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
GFI1Q99684 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GFI1Q99684 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
GFI1Q99684 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GFI1Q99684 AC006557.6-201ENST00000623071 864 ntBASIC16.48■□□□□ 0.23
GFI1Q99684 MARS-234ENST00000630571 216 ntTSL 5 BASIC16.48■□□□□ 0.23
GFI1Q99684 MARS-235ENST00000630803 183 ntTSL 3 BASIC16.48■□□□□ 0.23
GFI1Q99684 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GFI1Q99684 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.48■□□□□ 0.23
GFI1Q99684 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.48■□□□□ 0.23
GFI1Q99684 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
GFI1Q99684 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GFI1Q99684 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GFI1Q99684 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
GFI1Q99684 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
GFI1Q99684 AP006587.1-201ENST00000534129 1502 ntBASIC16.48■□□□□ 0.23
GFI1Q99684 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
GFI1Q99684 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.48■□□□□ 0.23
GFI1Q99684 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GFI1Q99684 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
GFI1Q99684 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GFI1Q99684 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GFI1Q99684 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GFI1Q99684 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
GFI1Q99684 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GFI1Q99684 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
GFI1Q99684 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GFI1Q99684 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
GFI1Q99684 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.47■□□□□ 0.23
GFI1Q99684 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.47■□□□□ 0.23
GFI1Q99684 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GFI1Q99684 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GFI1Q99684 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
GFI1Q99684 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GFI1Q99684 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
GFI1Q99684 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC16.47■□□□□ 0.23
GFI1Q99684 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
GFI1Q99684 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
GFI1Q99684 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC16.47■□□□□ 0.23
GFI1Q99684 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC16.47■□□□□ 0.23
GFI1Q99684 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GFI1Q99684 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GFI1Q99684 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GFI1Q99684 CRK-204ENST00000574295 1391 ntTSL 5 BASIC16.47■□□□□ 0.23
GFI1Q99684 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
GFI1Q99684 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
GFI1Q99684 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GFI1Q99684 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms