Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
MS4A4EQ96PG1 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
MS4A4EQ96PG1 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.84■□□□□ 0.45
MS4A4EQ96PG1 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.84■□□□□ 0.45
MS4A4EQ96PG1 RARRES2P10-201ENST00000564312 460 ntBASIC17.84■□□□□ 0.45
MS4A4EQ96PG1 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.84■□□□□ 0.45
MS4A4EQ96PG1 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
MS4A4EQ96PG1 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
MS4A4EQ96PG1 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MS4A4EQ96PG1 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MS4A4EQ96PG1 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
MS4A4EQ96PG1 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MS4A4EQ96PG1 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
MS4A4EQ96PG1 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MS4A4EQ96PG1 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MS4A4EQ96PG1 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
MS4A4EQ96PG1 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
MS4A4EQ96PG1 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
MS4A4EQ96PG1 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
MS4A4EQ96PG1 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.84■□□□□ 0.45
MS4A4EQ96PG1 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
MS4A4EQ96PG1 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
MS4A4EQ96PG1 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
MS4A4EQ96PG1 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
MS4A4EQ96PG1 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
MS4A4EQ96PG1 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
MS4A4EQ96PG1 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
MS4A4EQ96PG1 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
MS4A4EQ96PG1 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
MS4A4EQ96PG1 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.83■□□□□ 0.45
MS4A4EQ96PG1 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.45
MS4A4EQ96PG1 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
MS4A4EQ96PG1 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
MS4A4EQ96PG1 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.83■□□□□ 0.45
MS4A4EQ96PG1 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
MS4A4EQ96PG1 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MS4A4EQ96PG1 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
MS4A4EQ96PG1 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
MS4A4EQ96PG1 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.83■□□□□ 0.44
MS4A4EQ96PG1 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
MS4A4EQ96PG1 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.83■□□□□ 0.44
MS4A4EQ96PG1 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
MS4A4EQ96PG1 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
MS4A4EQ96PG1 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MS4A4EQ96PG1 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MS4A4EQ96PG1 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MS4A4EQ96PG1 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.83■□□□□ 0.44
MS4A4EQ96PG1 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.83■□□□□ 0.44
MS4A4EQ96PG1 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.83■□□□□ 0.44
MS4A4EQ96PG1 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.83■□□□□ 0.44
MS4A4EQ96PG1 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
MS4A4EQ96PG1 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.83■□□□□ 0.44
MS4A4EQ96PG1 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MS4A4EQ96PG1 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MS4A4EQ96PG1 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.82■□□□□ 0.44
MS4A4EQ96PG1 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MS4A4EQ96PG1 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MS4A4EQ96PG1 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MS4A4EQ96PG1 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.82■□□□□ 0.44
MS4A4EQ96PG1 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MS4A4EQ96PG1 PRORSD1P-201ENST00000295112 541 ntBASIC17.82■□□□□ 0.44
MS4A4EQ96PG1 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
MS4A4EQ96PG1 AC004980.1-204ENST00000429707 299 ntBASIC17.82■□□□□ 0.44
MS4A4EQ96PG1 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.82■□□□□ 0.44
MS4A4EQ96PG1 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.82■□□□□ 0.44
MS4A4EQ96PG1 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.82■□□□□ 0.44
MS4A4EQ96PG1 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.82■□□□□ 0.44
MS4A4EQ96PG1 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.82■□□□□ 0.44
MS4A4EQ96PG1 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
MS4A4EQ96PG1 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.82■□□□□ 0.44
MS4A4EQ96PG1 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MS4A4EQ96PG1 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MS4A4EQ96PG1 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.82■□□□□ 0.44
MS4A4EQ96PG1 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
MS4A4EQ96PG1 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MS4A4EQ96PG1 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MS4A4EQ96PG1 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.82■□□□□ 0.44
MS4A4EQ96PG1 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MS4A4EQ96PG1 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.82■□□□□ 0.44
MS4A4EQ96PG1 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MS4A4EQ96PG1 KRT16P1-201ENST00000399124 1418 ntBASIC17.81■□□□□ 0.44
MS4A4EQ96PG1 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MS4A4EQ96PG1 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MS4A4EQ96PG1 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MS4A4EQ96PG1 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.81■□□□□ 0.44
MS4A4EQ96PG1 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.81■□□□□ 0.44
MS4A4EQ96PG1 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MS4A4EQ96PG1 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MS4A4EQ96PG1 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MS4A4EQ96PG1 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MS4A4EQ96PG1 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.81■□□□□ 0.44
MS4A4EQ96PG1 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
MS4A4EQ96PG1 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MS4A4EQ96PG1 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.81■□□□□ 0.44
MS4A4EQ96PG1 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.81■□□□□ 0.44
MS4A4EQ96PG1 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.81■□□□□ 0.44
MS4A4EQ96PG1 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.81■□□□□ 0.44
MS4A4EQ96PG1 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.81■□□□□ 0.44
MS4A4EQ96PG1 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MS4A4EQ96PG1 AC006333.2-201ENST00000607957 2099 ntBASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms