Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CDCA5Q96FF9 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC22.39■■□□□ 1.17
CDCA5Q96FF9 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC22.39■■□□□ 1.17
CDCA5Q96FF9 MIR3917-201ENST00000580971 93 ntBASIC22.39■■□□□ 1.17
CDCA5Q96FF9 AL121912.1-201ENST00000603683 238 ntBASIC22.39■■□□□ 1.17
CDCA5Q96FF9 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
CDCA5Q96FF9 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
CDCA5Q96FF9 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
CDCA5Q96FF9 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CDCA5Q96FF9 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CDCA5Q96FF9 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CDCA5Q96FF9 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
CDCA5Q96FF9 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
CDCA5Q96FF9 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CDCA5Q96FF9 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
CDCA5Q96FF9 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CDCA5Q96FF9 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
CDCA5Q96FF9 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
CDCA5Q96FF9 STK25-234ENST00000535007 2459 ntTSL 2 BASIC22.38■■□□□ 1.17
CDCA5Q96FF9 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
CDCA5Q96FF9 AL691432.2-201ENST00000607222 2038 ntBASIC22.38■■□□□ 1.17
CDCA5Q96FF9 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CDCA5Q96FF9 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC22.38■■□□□ 1.17
CDCA5Q96FF9 AP005212.1-201ENST00000581547 1997 ntBASIC22.38■■□□□ 1.17
CDCA5Q96FF9 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CDCA5Q96FF9 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC22.38■■□□□ 1.17
CDCA5Q96FF9 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CDCA5Q96FF9 KRT16P4-201ENST00000453883 522 ntBASIC22.38■■□□□ 1.17
CDCA5Q96FF9 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC22.38■■□□□ 1.17
CDCA5Q96FF9 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC22.38■■□□□ 1.17
CDCA5Q96FF9 AC138894.3-201ENST00000603787 634 ntBASIC22.38■■□□□ 1.17
CDCA5Q96FF9 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CDCA5Q96FF9 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CDCA5Q96FF9 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
CDCA5Q96FF9 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CDCA5Q96FF9 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC22.38■■□□□ 1.17
CDCA5Q96FF9 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CDCA5Q96FF9 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC22.38■■□□□ 1.17
CDCA5Q96FF9 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
CDCA5Q96FF9 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC22.38■■□□□ 1.17
CDCA5Q96FF9 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC22.38■■□□□ 1.17
CDCA5Q96FF9 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CDCA5Q96FF9 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CDCA5Q96FF9 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
CDCA5Q96FF9 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC22.37■■□□□ 1.17
CDCA5Q96FF9 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CDCA5Q96FF9 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
CDCA5Q96FF9 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC22.37■■□□□ 1.17
CDCA5Q96FF9 MCCD1P1-208ENST00000445732 328 ntBASIC22.37■■□□□ 1.17
CDCA5Q96FF9 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC22.37■■□□□ 1.17
CDCA5Q96FF9 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC22.37■■□□□ 1.17
CDCA5Q96FF9 AC104819.1-201ENST00000504587 486 ntBASIC22.37■■□□□ 1.17
CDCA5Q96FF9 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC22.37■■□□□ 1.17
CDCA5Q96FF9 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
CDCA5Q96FF9 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC22.37■■□□□ 1.17
CDCA5Q96FF9 AC120114.3-201ENST00000611923 658 ntBASIC22.37■■□□□ 1.17
CDCA5Q96FF9 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
CDCA5Q96FF9 AC112497.1-201ENST00000624824 639 ntBASIC22.37■■□□□ 1.17
CDCA5Q96FF9 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CDCA5Q96FF9 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CDCA5Q96FF9 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CDCA5Q96FF9 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CDCA5Q96FF9 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
CDCA5Q96FF9 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
CDCA5Q96FF9 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CDCA5Q96FF9 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
CDCA5Q96FF9 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
CDCA5Q96FF9 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC22.36■■□□□ 1.17
CDCA5Q96FF9 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CDCA5Q96FF9 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CDCA5Q96FF9 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
CDCA5Q96FF9 HLA-A-201ENST00000376802 1334 ntBASIC22.35■■□□□ 1.17
CDCA5Q96FF9 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC22.35■■□□□ 1.17
CDCA5Q96FF9 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC22.35■■□□□ 1.17
CDCA5Q96FF9 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CDCA5Q96FF9 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CDCA5Q96FF9 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CDCA5Q96FF9 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC22.35■■□□□ 1.17
CDCA5Q96FF9 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CDCA5Q96FF9 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
CDCA5Q96FF9 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CDCA5Q96FF9 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
CDCA5Q96FF9 TSPY12P-201ENST00000421279 868 ntBASIC22.35■■□□□ 1.17
CDCA5Q96FF9 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC22.35■■□□□ 1.17
CDCA5Q96FF9 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC22.35■■□□□ 1.17
CDCA5Q96FF9 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC22.35■■□□□ 1.17
CDCA5Q96FF9 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CDCA5Q96FF9 AC139530.3-201ENST00000620344 690 ntBASIC22.35■■□□□ 1.17
CDCA5Q96FF9 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC22.35■■□□□ 1.17
CDCA5Q96FF9 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
CDCA5Q96FF9 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
CDCA5Q96FF9 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
CDCA5Q96FF9 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
CDCA5Q96FF9 UBC-206ENST00000538617 1303 ntTSL 5 BASIC22.34■■□□□ 1.17
CDCA5Q96FF9 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC22.34■■□□□ 1.17
CDCA5Q96FF9 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC22.34■■□□□ 1.17
CDCA5Q96FF9 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC22.34■■□□□ 1.17
CDCA5Q96FF9 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CDCA5Q96FF9 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC22.34■■□□□ 1.17
CDCA5Q96FF9 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms