Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 AL023875.1-201ENST00000640777 796 ntBASIC19.51■□□□□ 0.71
RTP4Q96DX8 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTP4Q96DX8 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
RTP4Q96DX8 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.51■□□□□ 0.71
RTP4Q96DX8 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RTP4Q96DX8 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
RTP4Q96DX8 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RTP4Q96DX8 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RTP4Q96DX8 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
RTP4Q96DX8 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.51■□□□□ 0.71
RTP4Q96DX8 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
RTP4Q96DX8 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTP4Q96DX8 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTP4Q96DX8 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
RTP4Q96DX8 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
RTP4Q96DX8 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTP4Q96DX8 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RTP4Q96DX8 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTP4Q96DX8 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RTP4Q96DX8 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.5■□□□□ 0.71
RTP4Q96DX8 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RTP4Q96DX8 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.5■□□□□ 0.71
RTP4Q96DX8 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RTP4Q96DX8 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.5■□□□□ 0.71
RTP4Q96DX8 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.5■□□□□ 0.71
RTP4Q96DX8 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
RTP4Q96DX8 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.5■□□□□ 0.71
RTP4Q96DX8 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RTP4Q96DX8 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RTP4Q96DX8 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RTP4Q96DX8 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.5■□□□□ 0.71
RTP4Q96DX8 KRASP1-201ENST00000407852 552 ntBASIC19.5■□□□□ 0.71
RTP4Q96DX8 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.5■□□□□ 0.71
RTP4Q96DX8 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RTP4Q96DX8 RPPH1-201ENST00000516869 333 ntBASIC19.5■□□□□ 0.71
RTP4Q96DX8 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RTP4Q96DX8 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.5■□□□□ 0.71
RTP4Q96DX8 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.5■□□□□ 0.71
RTP4Q96DX8 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.5■□□□□ 0.71
RTP4Q96DX8 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
RTP4Q96DX8 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RTP4Q96DX8 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RTP4Q96DX8 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RTP4Q96DX8 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
RTP4Q96DX8 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.5■□□□□ 0.71
RTP4Q96DX8 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTP4Q96DX8 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTP4Q96DX8 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTP4Q96DX8 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTP4Q96DX8 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
RTP4Q96DX8 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
RTP4Q96DX8 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
RTP4Q96DX8 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.49■□□□□ 0.71
RTP4Q96DX8 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RTP4Q96DX8 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.49■□□□□ 0.71
RTP4Q96DX8 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RTP4Q96DX8 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.49■□□□□ 0.71
RTP4Q96DX8 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.49■□□□□ 0.71
RTP4Q96DX8 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RTP4Q96DX8 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
RTP4Q96DX8 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.49■□□□□ 0.71
RTP4Q96DX8 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.49■□□□□ 0.71
RTP4Q96DX8 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RTP4Q96DX8 C1QBPP2-201ENST00000528754 825 ntBASIC19.49■□□□□ 0.71
RTP4Q96DX8 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.49■□□□□ 0.71
RTP4Q96DX8 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.49■□□□□ 0.71
RTP4Q96DX8 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTP4Q96DX8 AL445675.2-201ENST00000620291 557 ntBASIC19.49■□□□□ 0.71
RTP4Q96DX8 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.49■□□□□ 0.71
RTP4Q96DX8 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTP4Q96DX8 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTP4Q96DX8 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RTP4Q96DX8 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTP4Q96DX8 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTP4Q96DX8 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
RTP4Q96DX8 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.49■□□□□ 0.71
RTP4Q96DX8 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.49■□□□□ 0.71
RTP4Q96DX8 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
RTP4Q96DX8 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.49■□□□□ 0.71
RTP4Q96DX8 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTP4Q96DX8 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.48■□□□□ 0.71
RTP4Q96DX8 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTP4Q96DX8 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTP4Q96DX8 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTP4Q96DX8 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.48■□□□□ 0.71
RTP4Q96DX8 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTP4Q96DX8 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RTP4Q96DX8 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.48■□□□□ 0.71
RTP4Q96DX8 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.48■□□□□ 0.71
RTP4Q96DX8 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.48■□□□□ 0.71
RTP4Q96DX8 RN7SL471P-201ENST00000580476 299 ntBASIC19.48■□□□□ 0.71
RTP4Q96DX8 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.48■□□□□ 0.71
RTP4Q96DX8 FAM197Y4-202ENST00000622692 608 ntBASIC19.48■□□□□ 0.71
RTP4Q96DX8 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RTP4Q96DX8 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTP4Q96DX8 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.48■□□□□ 0.71
RTP4Q96DX8 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTP4Q96DX8 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
RTP4Q96DX8 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
RTP4Q96DX8 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms