Protein–RNA interactions for Protein: Q8N9W5

DNAAF3, Dynein assembly factor 3, axonemal, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF3Q8N9W5 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
DNAAF3Q8N9W5 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
DNAAF3Q8N9W5 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.47■□□□□ 0.71
DNAAF3Q8N9W5 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.47■□□□□ 0.71
DNAAF3Q8N9W5 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
DNAAF3Q8N9W5 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
DNAAF3Q8N9W5 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DNAAF3Q8N9W5 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
DNAAF3Q8N9W5 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DNAAF3Q8N9W5 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
DNAAF3Q8N9W5 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.47■□□□□ 0.71
DNAAF3Q8N9W5 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DNAAF3Q8N9W5 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DNAAF3Q8N9W5 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
DNAAF3Q8N9W5 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
DNAAF3Q8N9W5 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DNAAF3Q8N9W5 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
DNAAF3Q8N9W5 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DNAAF3Q8N9W5 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
DNAAF3Q8N9W5 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DNAAF3Q8N9W5 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DNAAF3Q8N9W5 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DNAAF3Q8N9W5 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DNAAF3Q8N9W5 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DNAAF3Q8N9W5 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DNAAF3Q8N9W5 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
DNAAF3Q8N9W5 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.46■□□□□ 0.71
DNAAF3Q8N9W5 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DNAAF3Q8N9W5 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
DNAAF3Q8N9W5 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
DNAAF3Q8N9W5 AC093503.3-201ENST00000624917 2352 ntBASIC19.46■□□□□ 0.71
DNAAF3Q8N9W5 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.46■□□□□ 0.71
DNAAF3Q8N9W5 KRASP1-201ENST00000407852 552 ntBASIC19.46■□□□□ 0.71
DNAAF3Q8N9W5 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
DNAAF3Q8N9W5 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.46■□□□□ 0.71
DNAAF3Q8N9W5 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
DNAAF3Q8N9W5 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.46■□□□□ 0.71
DNAAF3Q8N9W5 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
DNAAF3Q8N9W5 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
DNAAF3Q8N9W5 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.46■□□□□ 0.71
DNAAF3Q8N9W5 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
DNAAF3Q8N9W5 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DNAAF3Q8N9W5 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
DNAAF3Q8N9W5 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.45■□□□□ 0.7
DNAAF3Q8N9W5 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DNAAF3Q8N9W5 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.45■□□□□ 0.7
DNAAF3Q8N9W5 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DNAAF3Q8N9W5 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.45■□□□□ 0.7
DNAAF3Q8N9W5 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DNAAF3Q8N9W5 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DNAAF3Q8N9W5 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DNAAF3Q8N9W5 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DNAAF3Q8N9W5 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DNAAF3Q8N9W5 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
DNAAF3Q8N9W5 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.45■□□□□ 0.7
DNAAF3Q8N9W5 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.45■□□□□ 0.7
DNAAF3Q8N9W5 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DNAAF3Q8N9W5 C1QL1P1-201ENST00000568105 661 ntBASIC19.45■□□□□ 0.7
DNAAF3Q8N9W5 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
DNAAF3Q8N9W5 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.45■□□□□ 0.7
DNAAF3Q8N9W5 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DNAAF3Q8N9W5 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.45■□□□□ 0.7
DNAAF3Q8N9W5 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DNAAF3Q8N9W5 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
DNAAF3Q8N9W5 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
DNAAF3Q8N9W5 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DNAAF3Q8N9W5 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
DNAAF3Q8N9W5 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DNAAF3Q8N9W5 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DNAAF3Q8N9W5 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
DNAAF3Q8N9W5 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
DNAAF3Q8N9W5 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
DNAAF3Q8N9W5 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DNAAF3Q8N9W5 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DNAAF3Q8N9W5 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
DNAAF3Q8N9W5 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.44■□□□□ 0.7
DNAAF3Q8N9W5 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.44■□□□□ 0.7
DNAAF3Q8N9W5 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
DNAAF3Q8N9W5 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DNAAF3Q8N9W5 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.44■□□□□ 0.7
DNAAF3Q8N9W5 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
DNAAF3Q8N9W5 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DNAAF3Q8N9W5 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
DNAAF3Q8N9W5 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.44■□□□□ 0.7
DNAAF3Q8N9W5 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DNAAF3Q8N9W5 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.44■□□□□ 0.7
DNAAF3Q8N9W5 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.44■□□□□ 0.7
DNAAF3Q8N9W5 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
DNAAF3Q8N9W5 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
DNAAF3Q8N9W5 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DNAAF3Q8N9W5 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DNAAF3Q8N9W5 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
DNAAF3Q8N9W5 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.44■□□□□ 0.7
DNAAF3Q8N9W5 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DNAAF3Q8N9W5 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DNAAF3Q8N9W5 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
DNAAF3Q8N9W5 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DNAAF3Q8N9W5 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DNAAF3Q8N9W5 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
DNAAF3Q8N9W5 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms