Protein–RNA interactions for Protein: Q8N5G0

SMIM20, Small integral membrane protein 20, humanhuman

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM20Q8N5G0 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SMIM20Q8N5G0 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC11.93□□□□□ -0.5
SMIM20Q8N5G0 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
SMIM20Q8N5G0 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC11.93□□□□□ -0.5
SMIM20Q8N5G0 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
SMIM20Q8N5G0 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SMIM20Q8N5G0 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC11.93□□□□□ -0.5
SMIM20Q8N5G0 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC11.93□□□□□ -0.5
SMIM20Q8N5G0 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
SMIM20Q8N5G0 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SMIM20Q8N5G0 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SMIM20Q8N5G0 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SMIM20Q8N5G0 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SMIM20Q8N5G0 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SMIM20Q8N5G0 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
SMIM20Q8N5G0 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SMIM20Q8N5G0 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SMIM20Q8N5G0 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
SMIM20Q8N5G0 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SMIM20Q8N5G0 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC11.93□□□□□ -0.5
SMIM20Q8N5G0 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC11.93□□□□□ -0.5
SMIM20Q8N5G0 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SMIM20Q8N5G0 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
SMIM20Q8N5G0 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC11.92□□□□□ -0.5
SMIM20Q8N5G0 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM20Q8N5G0 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM20Q8N5G0 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC11.92□□□□□ -0.5
SMIM20Q8N5G0 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
SMIM20Q8N5G0 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM20Q8N5G0 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM20Q8N5G0 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC11.92□□□□□ -0.5
SMIM20Q8N5G0 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC11.92□□□□□ -0.5
SMIM20Q8N5G0 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM20Q8N5G0 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM20Q8N5G0 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM20Q8N5G0 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
SMIM20Q8N5G0 PPP1R26P4-201ENST00000619065 3527 ntBASIC11.92□□□□□ -0.5
SMIM20Q8N5G0 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
SMIM20Q8N5G0 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
SMIM20Q8N5G0 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM20Q8N5G0 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC11.92□□□□□ -0.5
SMIM20Q8N5G0 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC11.92□□□□□ -0.5
SMIM20Q8N5G0 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
SMIM20Q8N5G0 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM20Q8N5G0 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
SMIM20Q8N5G0 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM20Q8N5G0 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM20Q8N5G0 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC11.92□□□□□ -0.5
SMIM20Q8N5G0 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC11.92□□□□□ -0.5
SMIM20Q8N5G0 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM20Q8N5G0 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM20Q8N5G0 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM20Q8N5G0 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
SMIM20Q8N5G0 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
SMIM20Q8N5G0 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM20Q8N5G0 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC11.92□□□□□ -0.5
SMIM20Q8N5G0 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC11.92□□□□□ -0.5
SMIM20Q8N5G0 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC11.92□□□□□ -0.5
SMIM20Q8N5G0 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM20Q8N5G0 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM20Q8N5G0 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC11.92□□□□□ -0.5
SMIM20Q8N5G0 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM20Q8N5G0 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM20Q8N5G0 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM20Q8N5G0 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM20Q8N5G0 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC11.92□□□□□ -0.5
SMIM20Q8N5G0 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM20Q8N5G0 AC121338.2-201ENST00000622535 1744 ntBASIC11.91□□□□□ -0.5
SMIM20Q8N5G0 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SMIM20Q8N5G0 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SMIM20Q8N5G0 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SMIM20Q8N5G0 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SMIM20Q8N5G0 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC11.91□□□□□ -0.5
SMIM20Q8N5G0 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
SMIM20Q8N5G0 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SMIM20Q8N5G0 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC11.91□□□□□ -0.5
SMIM20Q8N5G0 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
SMIM20Q8N5G0 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SMIM20Q8N5G0 STK40-201ENST00000359297 4837 ntTSL 2 BASIC11.91□□□□□ -0.5
SMIM20Q8N5G0 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC11.91□□□□□ -0.5
SMIM20Q8N5G0 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
SMIM20Q8N5G0 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SMIM20Q8N5G0 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
SMIM20Q8N5G0 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC11.91□□□□□ -0.5
SMIM20Q8N5G0 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC11.91□□□□□ -0.5
SMIM20Q8N5G0 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC11.91□□□□□ -0.5
SMIM20Q8N5G0 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SMIM20Q8N5G0 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC11.91□□□□□ -0.5
SMIM20Q8N5G0 MIR6090-201ENST00000622481 60 ntBASIC11.91□□□□□ -0.5
SMIM20Q8N5G0 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
SMIM20Q8N5G0 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
SMIM20Q8N5G0 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SMIM20Q8N5G0 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
SMIM20Q8N5G0 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC11.91□□□□□ -0.5
SMIM20Q8N5G0 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
SMIM20Q8N5G0 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC11.91□□□□□ -0.5
SMIM20Q8N5G0 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SMIM20Q8N5G0 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
SMIM20Q8N5G0 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SMIM20Q8N5G0 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms