Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC12.83□□□□□ -0.36
LINC01561Q8N1V8 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
LINC01561Q8N1V8 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC12.83□□□□□ -0.36
LINC01561Q8N1V8 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
LINC01561Q8N1V8 ABHD17AP6-201ENST00000458502 1044 ntBASIC12.83□□□□□ -0.36
LINC01561Q8N1V8 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC12.83□□□□□ -0.36
LINC01561Q8N1V8 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
LINC01561Q8N1V8 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC12.83□□□□□ -0.36
LINC01561Q8N1V8 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01561Q8N1V8 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01561Q8N1V8 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC12.83□□□□□ -0.36
LINC01561Q8N1V8 AC090340.1-201ENST00000620778 4980 ntBASIC12.83□□□□□ -0.36
LINC01561Q8N1V8 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
LINC01561Q8N1V8 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01561Q8N1V8 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01561Q8N1V8 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01561Q8N1V8 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01561Q8N1V8 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
LINC01561Q8N1V8 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01561Q8N1V8 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01561Q8N1V8 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC12.83□□□□□ -0.36
LINC01561Q8N1V8 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC12.83□□□□□ -0.36
LINC01561Q8N1V8 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
LINC01561Q8N1V8 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01561Q8N1V8 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
LINC01561Q8N1V8 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01561Q8N1V8 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
LINC01561Q8N1V8 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
LINC01561Q8N1V8 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01561Q8N1V8 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01561Q8N1V8 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01561Q8N1V8 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01561Q8N1V8 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01561Q8N1V8 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
LINC01561Q8N1V8 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC12.82□□□□□ -0.36
LINC01561Q8N1V8 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01561Q8N1V8 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
LINC01561Q8N1V8 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
LINC01561Q8N1V8 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01561Q8N1V8 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01561Q8N1V8 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01561Q8N1V8 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC12.82□□□□□ -0.36
LINC01561Q8N1V8 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01561Q8N1V8 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01561Q8N1V8 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01561Q8N1V8 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
LINC01561Q8N1V8 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01561Q8N1V8 BX276092.2-201ENST00000417668 665 ntBASIC12.82□□□□□ -0.36
LINC01561Q8N1V8 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
LINC01561Q8N1V8 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
LINC01561Q8N1V8 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC12.82□□□□□ -0.36
LINC01561Q8N1V8 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC12.82□□□□□ -0.36
LINC01561Q8N1V8 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
LINC01561Q8N1V8 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01561Q8N1V8 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
LINC01561Q8N1V8 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC12.82□□□□□ -0.36
LINC01561Q8N1V8 MARS-234ENST00000630571 216 ntTSL 5 BASIC12.82□□□□□ -0.36
LINC01561Q8N1V8 MARS-235ENST00000630803 183 ntTSL 3 BASIC12.82□□□□□ -0.36
LINC01561Q8N1V8 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC12.82□□□□□ -0.36
LINC01561Q8N1V8 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01561Q8N1V8 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
LINC01561Q8N1V8 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC12.82□□□□□ -0.36
LINC01561Q8N1V8 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
LINC01561Q8N1V8 HR-201ENST00000312841 5351 ntTSL 5 BASIC12.82□□□□□ -0.36
LINC01561Q8N1V8 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC12.82□□□□□ -0.36
LINC01561Q8N1V8 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01561Q8N1V8 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01561Q8N1V8 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC12.82□□□□□ -0.36
LINC01561Q8N1V8 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01561Q8N1V8 COMP-202ENST00000425807 2292 ntTSL 2 BASIC12.82□□□□□ -0.36
LINC01561Q8N1V8 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC12.82□□□□□ -0.36
LINC01561Q8N1V8 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01561Q8N1V8 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01561Q8N1V8 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC12.82□□□□□ -0.36
LINC01561Q8N1V8 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01561Q8N1V8 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
LINC01561Q8N1V8 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01561Q8N1V8 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01561Q8N1V8 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01561Q8N1V8 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC12.81□□□□□ -0.36
LINC01561Q8N1V8 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
LINC01561Q8N1V8 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01561Q8N1V8 AC009113.1-201ENST00000570267 2443 ntBASIC12.81□□□□□ -0.36
LINC01561Q8N1V8 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01561Q8N1V8 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC12.81□□□□□ -0.36
LINC01561Q8N1V8 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01561Q8N1V8 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01561Q8N1V8 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC12.81□□□□□ -0.36
LINC01561Q8N1V8 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01561Q8N1V8 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC12.81□□□□□ -0.36
LINC01561Q8N1V8 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC12.81□□□□□ -0.36
LINC01561Q8N1V8 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC12.81□□□□□ -0.36
LINC01561Q8N1V8 AC105036.2-201ENST00000569468 176 ntBASIC12.81□□□□□ -0.36
LINC01561Q8N1V8 AL121829.2-201ENST00000620908 328 ntBASIC12.81□□□□□ -0.36
LINC01561Q8N1V8 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
LINC01561Q8N1V8 ANO7L1-203ENST00000602586 1720 ntBASIC12.81□□□□□ -0.36
LINC01561Q8N1V8 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC12.81□□□□□ -0.36
LINC01561Q8N1V8 USP49-202ENST00000373010 2446 ntTSL 5 BASIC12.81□□□□□ -0.36
LINC01561Q8N1V8 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
LINC01561Q8N1V8 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms