Protein–RNA interactions for Protein: Q6W3E5

GDPD4, Glycerophosphodiester phosphodiesterase domain-containing protein 4, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD4Q6W3E5 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GDPD4Q6W3E5 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GDPD4Q6W3E5 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.19■□□□□ 0.66
GDPD4Q6W3E5 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
GDPD4Q6W3E5 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GDPD4Q6W3E5 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GDPD4Q6W3E5 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GDPD4Q6W3E5 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
GDPD4Q6W3E5 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.18■□□□□ 0.66
GDPD4Q6W3E5 TEX21P-204ENST00000641479 1693 ntBASIC19.18■□□□□ 0.66
GDPD4Q6W3E5 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GDPD4Q6W3E5 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GDPD4Q6W3E5 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
GDPD4Q6W3E5 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
GDPD4Q6W3E5 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.18■□□□□ 0.66
GDPD4Q6W3E5 AC005521.1-201ENST00000393351 872 ntBASIC19.18■□□□□ 0.66
GDPD4Q6W3E5 AL137013.1-201ENST00000432946 1228 ntBASIC19.18■□□□□ 0.66
GDPD4Q6W3E5 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.18■□□□□ 0.66
GDPD4Q6W3E5 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.18■□□□□ 0.66
GDPD4Q6W3E5 AC010653.2-201ENST00000623505 997 ntBASIC19.18■□□□□ 0.66
GDPD4Q6W3E5 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
GDPD4Q6W3E5 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GDPD4Q6W3E5 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.18■□□□□ 0.66
GDPD4Q6W3E5 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
GDPD4Q6W3E5 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GDPD4Q6W3E5 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
GDPD4Q6W3E5 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
GDPD4Q6W3E5 AC093484.2-201ENST00000580996 2166 ntBASIC19.17■□□□□ 0.66
GDPD4Q6W3E5 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
GDPD4Q6W3E5 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
GDPD4Q6W3E5 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.17■□□□□ 0.66
GDPD4Q6W3E5 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
GDPD4Q6W3E5 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.17■□□□□ 0.66
GDPD4Q6W3E5 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
GDPD4Q6W3E5 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
GDPD4Q6W3E5 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GDPD4Q6W3E5 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.17■□□□□ 0.66
GDPD4Q6W3E5 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.17■□□□□ 0.66
GDPD4Q6W3E5 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.17■□□□□ 0.66
GDPD4Q6W3E5 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
GDPD4Q6W3E5 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.17■□□□□ 0.66
GDPD4Q6W3E5 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GDPD4Q6W3E5 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
GDPD4Q6W3E5 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GDPD4Q6W3E5 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GDPD4Q6W3E5 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GDPD4Q6W3E5 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
GDPD4Q6W3E5 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GDPD4Q6W3E5 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.16■□□□□ 0.66
GDPD4Q6W3E5 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.16■□□□□ 0.66
GDPD4Q6W3E5 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GDPD4Q6W3E5 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.16■□□□□ 0.66
GDPD4Q6W3E5 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.16■□□□□ 0.66
GDPD4Q6W3E5 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
GDPD4Q6W3E5 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GDPD4Q6W3E5 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GDPD4Q6W3E5 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
GDPD4Q6W3E5 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GDPD4Q6W3E5 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GDPD4Q6W3E5 TERF1P1-201ENST00000311003 1181 ntBASIC19.16■□□□□ 0.66
GDPD4Q6W3E5 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
GDPD4Q6W3E5 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.16■□□□□ 0.66
GDPD4Q6W3E5 HMGA1P5-201ENST00000412453 271 ntBASIC19.16■□□□□ 0.66
GDPD4Q6W3E5 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.16■□□□□ 0.66
GDPD4Q6W3E5 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GDPD4Q6W3E5 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.16■□□□□ 0.66
GDPD4Q6W3E5 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GDPD4Q6W3E5 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
GDPD4Q6W3E5 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GDPD4Q6W3E5 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GDPD4Q6W3E5 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.16■□□□□ 0.66
GDPD4Q6W3E5 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
GDPD4Q6W3E5 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GDPD4Q6W3E5 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GDPD4Q6W3E5 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
GDPD4Q6W3E5 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.15■□□□□ 0.66
GDPD4Q6W3E5 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GDPD4Q6W3E5 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GDPD4Q6W3E5 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
GDPD4Q6W3E5 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
GDPD4Q6W3E5 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.15■□□□□ 0.66
GDPD4Q6W3E5 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GDPD4Q6W3E5 LIN28AP1-201ENST00000429574 405 ntBASIC19.15■□□□□ 0.66
GDPD4Q6W3E5 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
GDPD4Q6W3E5 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.15■□□□□ 0.66
GDPD4Q6W3E5 AC010203.1-204ENST00000548782 407 ntBASIC19.15■□□□□ 0.66
GDPD4Q6W3E5 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
GDPD4Q6W3E5 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GDPD4Q6W3E5 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
GDPD4Q6W3E5 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GDPD4Q6W3E5 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.15■□□□□ 0.66
GDPD4Q6W3E5 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GDPD4Q6W3E5 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GDPD4Q6W3E5 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.15■□□□□ 0.66
GDPD4Q6W3E5 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.15■□□□□ 0.66
GDPD4Q6W3E5 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
GDPD4Q6W3E5 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.15■□□□□ 0.66
GDPD4Q6W3E5 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
GDPD4Q6W3E5 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GDPD4Q6W3E5 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms