Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
C11orf88Q6PI97 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
C11orf88Q6PI97 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.62■□□□□ 0.25
C11orf88Q6PI97 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
C11orf88Q6PI97 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.62■□□□□ 0.25
C11orf88Q6PI97 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
C11orf88Q6PI97 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
C11orf88Q6PI97 BMP1-204ENST00000397814 836 ntTSL 4 BASIC16.62■□□□□ 0.25
C11orf88Q6PI97 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16.62■□□□□ 0.25
C11orf88Q6PI97 GUSBP6-202ENST00000438529 1198 ntBASIC16.62■□□□□ 0.25
C11orf88Q6PI97 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
C11orf88Q6PI97 FAM21FP-204ENST00000608637 956 ntBASIC16.62■□□□□ 0.25
C11orf88Q6PI97 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC16.62■□□□□ 0.25
C11orf88Q6PI97 GAMT-205ENST00000640762 751 ntTSL 5 BASIC16.62■□□□□ 0.25
C11orf88Q6PI97 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
C11orf88Q6PI97 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.62■□□□□ 0.25
C11orf88Q6PI97 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
C11orf88Q6PI97 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
C11orf88Q6PI97 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
C11orf88Q6PI97 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
C11orf88Q6PI97 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
C11orf88Q6PI97 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
C11orf88Q6PI97 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC16.62■□□□□ 0.25
C11orf88Q6PI97 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
C11orf88Q6PI97 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
C11orf88Q6PI97 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
C11orf88Q6PI97 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
C11orf88Q6PI97 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
C11orf88Q6PI97 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.61■□□□□ 0.25
C11orf88Q6PI97 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
C11orf88Q6PI97 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
C11orf88Q6PI97 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
C11orf88Q6PI97 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.61■□□□□ 0.25
C11orf88Q6PI97 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
C11orf88Q6PI97 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.61■□□□□ 0.25
C11orf88Q6PI97 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.61■□□□□ 0.25
C11orf88Q6PI97 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC16.61■□□□□ 0.25
C11orf88Q6PI97 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
C11orf88Q6PI97 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
C11orf88Q6PI97 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
C11orf88Q6PI97 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
C11orf88Q6PI97 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
C11orf88Q6PI97 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
C11orf88Q6PI97 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
C11orf88Q6PI97 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
C11orf88Q6PI97 AL512625.2-201ENST00000417533 625 ntBASIC16.61■□□□□ 0.25
C11orf88Q6PI97 PTPA-214ENST00000423100 988 ntTSL 2 BASIC16.61■□□□□ 0.25
C11orf88Q6PI97 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC16.61■□□□□ 0.25
C11orf88Q6PI97 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
C11orf88Q6PI97 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
C11orf88Q6PI97 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
C11orf88Q6PI97 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
C11orf88Q6PI97 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
C11orf88Q6PI97 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
C11orf88Q6PI97 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
C11orf88Q6PI97 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.61■□□□□ 0.25
C11orf88Q6PI97 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.61■□□□□ 0.25
C11orf88Q6PI97 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
C11orf88Q6PI97 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
C11orf88Q6PI97 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
C11orf88Q6PI97 KRT8P36-201ENST00000489121 1440 ntBASIC16.61■□□□□ 0.25
C11orf88Q6PI97 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
C11orf88Q6PI97 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
C11orf88Q6PI97 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
C11orf88Q6PI97 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
C11orf88Q6PI97 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.6■□□□□ 0.25
C11orf88Q6PI97 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
C11orf88Q6PI97 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
C11orf88Q6PI97 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
C11orf88Q6PI97 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
C11orf88Q6PI97 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
C11orf88Q6PI97 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
C11orf88Q6PI97 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
C11orf88Q6PI97 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC16.6■□□□□ 0.25
C11orf88Q6PI97 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC16.6■□□□□ 0.25
C11orf88Q6PI97 KRT18P6-201ENST00000555540 1265 ntBASIC16.6■□□□□ 0.25
C11orf88Q6PI97 AC243732.1-201ENST00000612648 864 ntBASIC16.6■□□□□ 0.25
C11orf88Q6PI97 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC16.6■□□□□ 0.25
C11orf88Q6PI97 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
C11orf88Q6PI97 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
C11orf88Q6PI97 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.6■□□□□ 0.25
C11orf88Q6PI97 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
C11orf88Q6PI97 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
C11orf88Q6PI97 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.6■□□□□ 0.25
C11orf88Q6PI97 RBM17P2-201ENST00000616397 1405 ntBASIC16.6■□□□□ 0.25
C11orf88Q6PI97 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
C11orf88Q6PI97 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
C11orf88Q6PI97 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
C11orf88Q6PI97 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
C11orf88Q6PI97 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC16.6■□□□□ 0.25
C11orf88Q6PI97 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
C11orf88Q6PI97 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
C11orf88Q6PI97 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.59■□□□□ 0.25
C11orf88Q6PI97 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
C11orf88Q6PI97 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.59■□□□□ 0.25
C11orf88Q6PI97 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
C11orf88Q6PI97 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
C11orf88Q6PI97 AL133373.2-201ENST00000623187 2828 ntBASIC16.59■□□□□ 0.25
C11orf88Q6PI97 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
C11orf88Q6PI97 ABHD17AP1-201ENST00000358206 933 ntBASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms