Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
PTPN20Q4JDL3 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PTPN20Q4JDL3 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.14■□□□□ 0.81
PTPN20Q4JDL3 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PTPN20Q4JDL3 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PTPN20Q4JDL3 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
PTPN20Q4JDL3 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
PTPN20Q4JDL3 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.13■□□□□ 0.81
PTPN20Q4JDL3 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PTPN20Q4JDL3 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PTPN20Q4JDL3 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.13■□□□□ 0.81
PTPN20Q4JDL3 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PTPN20Q4JDL3 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.13■□□□□ 0.81
PTPN20Q4JDL3 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PTPN20Q4JDL3 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PTPN20Q4JDL3 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.13■□□□□ 0.81
PTPN20Q4JDL3 NUDT16P1-203ENST00000513809 620 ntBASIC20.13■□□□□ 0.81
PTPN20Q4JDL3 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.13■□□□□ 0.81
PTPN20Q4JDL3 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
PTPN20Q4JDL3 AC130371.2-201ENST00000619443 611 ntBASIC20.13■□□□□ 0.81
PTPN20Q4JDL3 TNXA-203ENST00000507684 2038 ntBASIC20.13■□□□□ 0.81
PTPN20Q4JDL3 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PTPN20Q4JDL3 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.13■□□□□ 0.81
PTPN20Q4JDL3 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
PTPN20Q4JDL3 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.13■□□□□ 0.81
PTPN20Q4JDL3 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PTPN20Q4JDL3 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PTPN20Q4JDL3 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
PTPN20Q4JDL3 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTPN20Q4JDL3 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTPN20Q4JDL3 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
PTPN20Q4JDL3 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
PTPN20Q4JDL3 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.12■□□□□ 0.81
PTPN20Q4JDL3 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTPN20Q4JDL3 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTPN20Q4JDL3 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.12■□□□□ 0.81
PTPN20Q4JDL3 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.12■□□□□ 0.81
PTPN20Q4JDL3 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTPN20Q4JDL3 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
PTPN20Q4JDL3 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.12■□□□□ 0.81
PTPN20Q4JDL3 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
PTPN20Q4JDL3 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTPN20Q4JDL3 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
PTPN20Q4JDL3 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
PTPN20Q4JDL3 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.12■□□□□ 0.81
PTPN20Q4JDL3 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PTPN20Q4JDL3 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.12■□□□□ 0.81
PTPN20Q4JDL3 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.12■□□□□ 0.81
PTPN20Q4JDL3 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.12■□□□□ 0.81
PTPN20Q4JDL3 AP001412.1-201ENST00000608405 714 ntBASIC20.12■□□□□ 0.81
PTPN20Q4JDL3 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.12■□□□□ 0.81
PTPN20Q4JDL3 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTPN20Q4JDL3 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTPN20Q4JDL3 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
PTPN20Q4JDL3 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.12■□□□□ 0.81
PTPN20Q4JDL3 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
PTPN20Q4JDL3 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PTPN20Q4JDL3 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
PTPN20Q4JDL3 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
PTPN20Q4JDL3 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PTPN20Q4JDL3 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.11■□□□□ 0.81
PTPN20Q4JDL3 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.11■□□□□ 0.81
PTPN20Q4JDL3 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.11■□□□□ 0.81
PTPN20Q4JDL3 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PTPN20Q4JDL3 AC116562.2-201ENST00000507042 360 ntBASIC20.11■□□□□ 0.81
PTPN20Q4JDL3 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.11■□□□□ 0.81
PTPN20Q4JDL3 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.11■□□□□ 0.81
PTPN20Q4JDL3 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.11■□□□□ 0.81
PTPN20Q4JDL3 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.11■□□□□ 0.81
PTPN20Q4JDL3 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PTPN20Q4JDL3 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.11■□□□□ 0.81
PTPN20Q4JDL3 FSCN1P1-201ENST00000568912 1481 ntBASIC20.11■□□□□ 0.81
PTPN20Q4JDL3 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
PTPN20Q4JDL3 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PTPN20Q4JDL3 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.11■□□□□ 0.81
PTPN20Q4JDL3 AC006333.2-201ENST00000607957 2099 ntBASIC20.11■□□□□ 0.81
PTPN20Q4JDL3 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PTPN20Q4JDL3 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.1■□□□□ 0.81
PTPN20Q4JDL3 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.1■□□□□ 0.81
PTPN20Q4JDL3 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PTPN20Q4JDL3 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
PTPN20Q4JDL3 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.1■□□□□ 0.81
PTPN20Q4JDL3 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
PTPN20Q4JDL3 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PTPN20Q4JDL3 MIR718-201ENST00000390190 70 ntBASIC20.1■□□□□ 0.81
PTPN20Q4JDL3 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.1■□□□□ 0.81
PTPN20Q4JDL3 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PTPN20Q4JDL3 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
PTPN20Q4JDL3 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
PTPN20Q4JDL3 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PTPN20Q4JDL3 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PTPN20Q4JDL3 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTPN20Q4JDL3 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PTPN20Q4JDL3 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
PTPN20Q4JDL3 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTPN20Q4JDL3 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.09■□□□□ 0.81
PTPN20Q4JDL3 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTPN20Q4JDL3 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.09■□□□□ 0.81
PTPN20Q4JDL3 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTPN20Q4JDL3 TSPY7P-201ENST00000431358 1114 ntBASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms