Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.42■□□□□ 0.54
HMGCS1Q01581 AC069544.1-201ENST00000609399 999 ntBASIC18.42■□□□□ 0.54
HMGCS1Q01581 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.42■□□□□ 0.54
HMGCS1Q01581 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HMGCS1Q01581 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMGCS1Q01581 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HMGCS1Q01581 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
HMGCS1Q01581 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HMGCS1Q01581 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.42■□□□□ 0.54
HMGCS1Q01581 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMGCS1Q01581 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMGCS1Q01581 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
HMGCS1Q01581 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HMGCS1Q01581 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMGCS1Q01581 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMGCS1Q01581 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
HMGCS1Q01581 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.41■□□□□ 0.54
HMGCS1Q01581 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMGCS1Q01581 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMGCS1Q01581 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMGCS1Q01581 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMGCS1Q01581 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.41■□□□□ 0.54
HMGCS1Q01581 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.41■□□□□ 0.54
HMGCS1Q01581 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HMGCS1Q01581 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMGCS1Q01581 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMGCS1Q01581 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
HMGCS1Q01581 AC026366.1-201ENST00000488803 879 ntBASIC18.41■□□□□ 0.54
HMGCS1Q01581 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
HMGCS1Q01581 MTDHP1-201ENST00000605323 784 ntBASIC18.41■□□□□ 0.54
HMGCS1Q01581 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMGCS1Q01581 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.41■□□□□ 0.54
HMGCS1Q01581 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMGCS1Q01581 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMGCS1Q01581 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMGCS1Q01581 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMGCS1Q01581 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMGCS1Q01581 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HMGCS1Q01581 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.41■□□□□ 0.54
HMGCS1Q01581 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMGCS1Q01581 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
HMGCS1Q01581 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
HMGCS1Q01581 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCS1Q01581 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCS1Q01581 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.4■□□□□ 0.54
HMGCS1Q01581 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.4■□□□□ 0.54
HMGCS1Q01581 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.4■□□□□ 0.54
HMGCS1Q01581 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
HMGCS1Q01581 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.4■□□□□ 0.54
HMGCS1Q01581 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.4■□□□□ 0.54
HMGCS1Q01581 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.4■□□□□ 0.54
HMGCS1Q01581 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCS1Q01581 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCS1Q01581 KRT17P3-201ENST00000420566 1262 ntBASIC18.4■□□□□ 0.54
HMGCS1Q01581 HLA-A-209ENST00000638375 975 ntBASIC18.4■□□□□ 0.54
HMGCS1Q01581 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCS1Q01581 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCS1Q01581 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCS1Q01581 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCS1Q01581 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCS1Q01581 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCS1Q01581 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.4■□□□□ 0.54
HMGCS1Q01581 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
HMGCS1Q01581 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCS1Q01581 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
HMGCS1Q01581 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCS1Q01581 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCS1Q01581 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCS1Q01581 FEM1AP3-201ENST00000403722 1741 ntBASIC18.4■□□□□ 0.54
HMGCS1Q01581 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCS1Q01581 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCS1Q01581 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCS1Q01581 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCS1Q01581 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCS1Q01581 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCS1Q01581 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCS1Q01581 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
HMGCS1Q01581 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.39■□□□□ 0.54
HMGCS1Q01581 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
HMGCS1Q01581 AC104581.1-202ENST00000635932 2618 ntBASIC18.39■□□□□ 0.54
HMGCS1Q01581 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMGCS1Q01581 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.39■□□□□ 0.53
HMGCS1Q01581 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMGCS1Q01581 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMGCS1Q01581 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMGCS1Q01581 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.39■□□□□ 0.53
HMGCS1Q01581 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMGCS1Q01581 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMGCS1Q01581 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMGCS1Q01581 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.39■□□□□ 0.53
HMGCS1Q01581 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMGCS1Q01581 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HMGCS1Q01581 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.39■□□□□ 0.53
HMGCS1Q01581 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HMGCS1Q01581 C1QL1P1-201ENST00000568105 661 ntBASIC18.39■□□□□ 0.53
HMGCS1Q01581 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.39■□□□□ 0.53
HMGCS1Q01581 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.39■□□□□ 0.53
HMGCS1Q01581 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.39■□□□□ 0.53
HMGCS1Q01581 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMGCS1Q01581 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms