Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCL20P78556 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.06■□□□□ 0
CCL20P78556 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCL20P78556 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCL20P78556 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.06■□□□□ 0
CCL20P78556 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCL20P78556 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.06■□□□□ 0
CCL20P78556 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCL20P78556 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CCL20P78556 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.06■□□□□ 0
CCL20P78556 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCL20P78556 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC15.06■□□□□ 0
CCL20P78556 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC15.06■□□□□ 0
CCL20P78556 GRAMD4P7-201ENST00000578182 1232 ntBASIC15.06■□□□□ 0
CCL20P78556 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
CCL20P78556 MPST-204ENST00000404393 1329 ntTSL 5 BASIC15.06■□□□□ 0
CCL20P78556 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCL20P78556 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CCL20P78556 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CCL20P78556 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCL20P78556 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC15.06■□□□□ 0
CCL20P78556 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCL20P78556 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCL20P78556 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCL20P78556 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCL20P78556 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCL20P78556 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.06■□□□□ 0
CCL20P78556 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC15.06■□□□□ 0
CCL20P78556 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
CCL20P78556 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC15.06■□□□□ 0
CCL20P78556 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CCL20P78556 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC15.06■□□□□ 0
CCL20P78556 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.05■□□□□ 0
CCL20P78556 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ 0
CCL20P78556 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.05■□□□□ 0
CCL20P78556 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.05■□□□□ 0
CCL20P78556 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CCL20P78556 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CCL20P78556 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
CCL20P78556 AL139384.1-201ENST00000612143 3047 ntBASIC15.05■□□□□ 0
CCL20P78556 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CCL20P78556 MIR572-201ENST00000384983 95 ntBASIC15.05■□□□□ -0
CCL20P78556 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC15.05■□□□□ -0
CCL20P78556 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC15.05■□□□□ -0
CCL20P78556 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC15.05■□□□□ -0
CCL20P78556 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC15.05■□□□□ -0
CCL20P78556 AL162741.1-201ENST00000565563 1558 ntBASIC15.05■□□□□ -0
CCL20P78556 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC15.05■□□□□ -0
CCL20P78556 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC15.05■□□□□ -0
CCL20P78556 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC15.05■□□□□ -0
CCL20P78556 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC15.05■□□□□ -0
CCL20P78556 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC15.05■□□□□ -0
CCL20P78556 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CCL20P78556 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.05■□□□□ -0
CCL20P78556 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CCL20P78556 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CCL20P78556 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CCL20P78556 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
CCL20P78556 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CCL20P78556 HTR7P1-202ENST00000624664 4411 ntBASIC15.05■□□□□ -0
CCL20P78556 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC15.05■□□□□ -0
CCL20P78556 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
CCL20P78556 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC15.05■□□□□ -0
CCL20P78556 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC15.04■□□□□ -0
CCL20P78556 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.04■□□□□ -0
CCL20P78556 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CCL20P78556 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.04■□□□□ -0
CCL20P78556 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CCL20P78556 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CCL20P78556 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CCL20P78556 AC012317.2-201ENST00000623305 2251 ntBASIC15.04■□□□□ -0
CCL20P78556 AC141586.5-201ENST00000624546 2050 ntBASIC15.04■□□□□ -0
CCL20P78556 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
CCL20P78556 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
CCL20P78556 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CCL20P78556 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CCL20P78556 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CCL20P78556 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
CCL20P78556 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CCL20P78556 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC15.04■□□□□ -0
CCL20P78556 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC15.04■□□□□ -0
CCL20P78556 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC15.04■□□□□ -0
CCL20P78556 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CCL20P78556 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC15.04■□□□□ -0
CCL20P78556 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC15.04■□□□□ -0
CCL20P78556 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CCL20P78556 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC15.04■□□□□ -0
CCL20P78556 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC15.04■□□□□ -0
CCL20P78556 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC15.04■□□□□ -0
CCL20P78556 GRAMD4P2-201ENST00000423297 1097 ntBASIC15.04■□□□□ -0
CCL20P78556 CDV3P1-201ENST00000471403 739 ntBASIC15.04■□□□□ -0
CCL20P78556 RARRES2P1-201ENST00000474487 481 ntBASIC15.04■□□□□ -0
CCL20P78556 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC15.04■□□□□ -0
CCL20P78556 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC15.04■□□□□ -0
CCL20P78556 AC008764.7-201ENST00000593779 1081 ntBASIC15.04■□□□□ -0
CCL20P78556 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.04■□□□□ -0
CCL20P78556 AC135776.1-201ENST00000319817 2481 ntBASIC15.04■□□□□ -0
CCL20P78556 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CCL20P78556 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CCL20P78556 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms