Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
SEC61A1P61619 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC16.71■□□□□ 0.27
SEC61A1P61619 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.71■□□□□ 0.27
SEC61A1P61619 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
SEC61A1P61619 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.71■□□□□ 0.27
SEC61A1P61619 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC16.71■□□□□ 0.27
SEC61A1P61619 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
SEC61A1P61619 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
SEC61A1P61619 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
SEC61A1P61619 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SEC61A1P61619 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
SEC61A1P61619 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SEC61A1P61619 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SEC61A1P61619 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SEC61A1P61619 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SEC61A1P61619 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SEC61A1P61619 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SEC61A1P61619 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SEC61A1P61619 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SEC61A1P61619 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SEC61A1P61619 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SEC61A1P61619 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SEC61A1P61619 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SEC61A1P61619 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SEC61A1P61619 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.7■□□□□ 0.26
SEC61A1P61619 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SEC61A1P61619 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.7■□□□□ 0.26
SEC61A1P61619 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SEC61A1P61619 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SEC61A1P61619 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SEC61A1P61619 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SEC61A1P61619 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.7■□□□□ 0.26
SEC61A1P61619 AC093827.2-201ENST00000512654 315 ntBASIC16.7■□□□□ 0.26
SEC61A1P61619 C1QBPP2-201ENST00000528754 825 ntBASIC16.7■□□□□ 0.26
SEC61A1P61619 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SEC61A1P61619 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SEC61A1P61619 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SEC61A1P61619 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SEC61A1P61619 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SEC61A1P61619 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SEC61A1P61619 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SEC61A1P61619 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SEC61A1P61619 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SEC61A1P61619 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
SEC61A1P61619 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SEC61A1P61619 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
SEC61A1P61619 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
SEC61A1P61619 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
SEC61A1P61619 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.69■□□□□ 0.26
SEC61A1P61619 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SEC61A1P61619 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC16.69■□□□□ 0.26
SEC61A1P61619 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC16.69■□□□□ 0.26
SEC61A1P61619 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.69■□□□□ 0.26
SEC61A1P61619 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SEC61A1P61619 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SEC61A1P61619 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.69■□□□□ 0.26
SEC61A1P61619 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SEC61A1P61619 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SEC61A1P61619 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
SEC61A1P61619 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SEC61A1P61619 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SEC61A1P61619 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
SEC61A1P61619 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SEC61A1P61619 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
SEC61A1P61619 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.69■□□□□ 0.26
SEC61A1P61619 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.69■□□□□ 0.26
SEC61A1P61619 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC16.69■□□□□ 0.26
SEC61A1P61619 AC120498.8-201ENST00000614275 531 ntBASIC16.69■□□□□ 0.26
SEC61A1P61619 AL359736.2-201ENST00000621992 437 ntBASIC16.69■□□□□ 0.26
SEC61A1P61619 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SEC61A1P61619 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SEC61A1P61619 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SEC61A1P61619 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.69■□□□□ 0.26
SEC61A1P61619 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC16.69■□□□□ 0.26
SEC61A1P61619 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SEC61A1P61619 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SEC61A1P61619 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.69■□□□□ 0.26
SEC61A1P61619 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SEC61A1P61619 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.69■□□□□ 0.26
SEC61A1P61619 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SEC61A1P61619 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SEC61A1P61619 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SEC61A1P61619 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SEC61A1P61619 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SEC61A1P61619 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.68■□□□□ 0.26
SEC61A1P61619 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.68■□□□□ 0.26
SEC61A1P61619 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SEC61A1P61619 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SEC61A1P61619 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.68■□□□□ 0.26
SEC61A1P61619 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SEC61A1P61619 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC16.68■□□□□ 0.26
SEC61A1P61619 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.68■□□□□ 0.26
SEC61A1P61619 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SEC61A1P61619 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SEC61A1P61619 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SEC61A1P61619 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
SEC61A1P61619 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SEC61A1P61619 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC16.68■□□□□ 0.26
SEC61A1P61619 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SEC61A1P61619 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms