Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CKS1BP61024 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC13.36□□□□□ -0.27
CKS1BP61024 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
CKS1BP61024 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
CKS1BP61024 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CKS1BP61024 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CKS1BP61024 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CKS1BP61024 AL691432.2-201ENST00000607222 2038 ntBASIC13.35□□□□□ -0.27
CKS1BP61024 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CKS1BP61024 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CKS1BP61024 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CKS1BP61024 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CKS1BP61024 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CKS1BP61024 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.35□□□□□ -0.27
CKS1BP61024 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CKS1BP61024 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CKS1BP61024 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CKS1BP61024 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC13.35□□□□□ -0.27
CKS1BP61024 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CKS1BP61024 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CKS1BP61024 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CKS1BP61024 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC13.35□□□□□ -0.27
CKS1BP61024 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CKS1BP61024 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CKS1BP61024 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CKS1BP61024 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC13.35□□□□□ -0.27
CKS1BP61024 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC13.35□□□□□ -0.27
CKS1BP61024 AC097381.1-201ENST00000429019 1296 ntBASIC13.35□□□□□ -0.27
CKS1BP61024 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CKS1BP61024 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC13.35□□□□□ -0.27
CKS1BP61024 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC13.35□□□□□ -0.27
CKS1BP61024 AC243732.1-201ENST00000612648 864 ntBASIC13.35□□□□□ -0.27
CKS1BP61024 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CKS1BP61024 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC13.35□□□□□ -0.27
CKS1BP61024 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
CKS1BP61024 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CKS1BP61024 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CKS1BP61024 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CKS1BP61024 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CKS1BP61024 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC13.35□□□□□ -0.27
CKS1BP61024 BX119927.1-201ENST00000636596 1552 ntBASIC13.35□□□□□ -0.27
CKS1BP61024 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CKS1BP61024 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC13.35□□□□□ -0.27
CKS1BP61024 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CKS1BP61024 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
CKS1BP61024 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CKS1BP61024 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC13.35□□□□□ -0.27
CKS1BP61024 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CKS1BP61024 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC13.35□□□□□ -0.27
CKS1BP61024 GOLGA2P11-201ENST00000562660 1621 ntBASIC13.35□□□□□ -0.27
CKS1BP61024 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CKS1BP61024 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CKS1BP61024 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CKS1BP61024 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CKS1BP61024 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CKS1BP61024 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
CKS1BP61024 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CKS1BP61024 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CKS1BP61024 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC13.34□□□□□ -0.27
CKS1BP61024 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CKS1BP61024 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CKS1BP61024 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
CKS1BP61024 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CKS1BP61024 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CKS1BP61024 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CKS1BP61024 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CKS1BP61024 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CKS1BP61024 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC13.34□□□□□ -0.27
CKS1BP61024 AC018695.7-201ENST00000624587 2492 ntBASIC13.34□□□□□ -0.27
CKS1BP61024 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CKS1BP61024 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC13.34□□□□□ -0.27
CKS1BP61024 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CKS1BP61024 AL390961.4-201ENST00000623958 2535 ntBASIC13.34□□□□□ -0.27
CKS1BP61024 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CKS1BP61024 HYI-206ENST00000372434 1025 ntTSL 5 BASIC13.34□□□□□ -0.27
CKS1BP61024 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CKS1BP61024 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CKS1BP61024 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CKS1BP61024 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC13.34□□□□□ -0.27
CKS1BP61024 TERF1P2-201ENST00000583350 1212 ntBASIC13.34□□□□□ -0.27
CKS1BP61024 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC13.34□□□□□ -0.27
CKS1BP61024 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CKS1BP61024 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CKS1BP61024 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC13.34□□□□□ -0.27
CKS1BP61024 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CKS1BP61024 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
CKS1BP61024 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC13.34□□□□□ -0.27
CKS1BP61024 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC13.34□□□□□ -0.27
CKS1BP61024 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CKS1BP61024 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CKS1BP61024 AC125437.2-201ENST00000625180 2167 ntBASIC13.34□□□□□ -0.27
CKS1BP61024 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC13.34□□□□□ -0.27
CKS1BP61024 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CKS1BP61024 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CKS1BP61024 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CKS1BP61024 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
CKS1BP61024 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CKS1BP61024 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CKS1BP61024 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
CKS1BP61024 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms