Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLRN1P58418 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.08■□□□□ 0.33
CLRN1P58418 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
CLRN1P58418 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
CLRN1P58418 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLRN1P58418 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.08■□□□□ 0.33
CLRN1P58418 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CLRN1P58418 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
CLRN1P58418 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.08■□□□□ 0.33
CLRN1P58418 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLRN1P58418 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLRN1P58418 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLRN1P58418 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CLRN1P58418 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.08■□□□□ 0.32
CLRN1P58418 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLRN1P58418 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLRN1P58418 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.08■□□□□ 0.32
CLRN1P58418 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLRN1P58418 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLRN1P58418 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CLRN1P58418 RPPH1-201ENST00000516869 333 ntBASIC17.08■□□□□ 0.32
CLRN1P58418 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.08■□□□□ 0.32
CLRN1P58418 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLRN1P58418 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLRN1P58418 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.08■□□□□ 0.32
CLRN1P58418 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLRN1P58418 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CLRN1P58418 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CLRN1P58418 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
CLRN1P58418 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLRN1P58418 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLRN1P58418 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLRN1P58418 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLRN1P58418 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLRN1P58418 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CLRN1P58418 AC098818.2-201ENST00000564925 2320 ntBASIC17.07■□□□□ 0.32
CLRN1P58418 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.07■□□□□ 0.32
CLRN1P58418 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.07■□□□□ 0.32
CLRN1P58418 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.07■□□□□ 0.32
CLRN1P58418 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CLRN1P58418 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLRN1P58418 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLRN1P58418 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLRN1P58418 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLRN1P58418 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.07■□□□□ 0.32
CLRN1P58418 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLRN1P58418 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.07■□□□□ 0.32
CLRN1P58418 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.07■□□□□ 0.32
CLRN1P58418 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.07■□□□□ 0.32
CLRN1P58418 ITM2C-210ENST00000620962 501 ntBASIC17.07■□□□□ 0.32
CLRN1P58418 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CLRN1P58418 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLRN1P58418 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
CLRN1P58418 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLRN1P58418 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLRN1P58418 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLRN1P58418 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.07■□□□□ 0.32
CLRN1P58418 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLRN1P58418 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CLRN1P58418 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CLRN1P58418 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLRN1P58418 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLRN1P58418 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.07■□□□□ 0.32
CLRN1P58418 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLRN1P58418 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CLRN1P58418 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CLRN1P58418 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CLRN1P58418 AL161938.1-201ENST00000569833 2180 ntBASIC17.06■□□□□ 0.32
CLRN1P58418 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLRN1P58418 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLRN1P58418 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLRN1P58418 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLRN1P58418 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
CLRN1P58418 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLRN1P58418 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
CLRN1P58418 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLRN1P58418 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLRN1P58418 AP002982.1-201ENST00000492365 877 ntBASIC17.06■□□□□ 0.32
CLRN1P58418 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLRN1P58418 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.06■□□□□ 0.32
CLRN1P58418 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.06■□□□□ 0.32
CLRN1P58418 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.06■□□□□ 0.32
CLRN1P58418 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLRN1P58418 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLRN1P58418 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLRN1P58418 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLRN1P58418 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLRN1P58418 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLRN1P58418 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CLRN1P58418 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLRN1P58418 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CLRN1P58418 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
CLRN1P58418 HTR7P1-201ENST00000538670 1336 ntBASIC17.05■□□□□ 0.32
CLRN1P58418 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLRN1P58418 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLRN1P58418 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.05■□□□□ 0.32
CLRN1P58418 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.05■□□□□ 0.32
CLRN1P58418 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CLRN1P58418 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLRN1P58418 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms