Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.65■□□□□ 0.9
PDE6CP51160 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PDE6CP51160 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
PDE6CP51160 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.65■□□□□ 0.9
PDE6CP51160 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PDE6CP51160 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PDE6CP51160 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PDE6CP51160 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PDE6CP51160 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
PDE6CP51160 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.65■□□□□ 0.9
PDE6CP51160 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.65■□□□□ 0.9
PDE6CP51160 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.65■□□□□ 0.9
PDE6CP51160 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.65■□□□□ 0.9
PDE6CP51160 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PDE6CP51160 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDE6CP51160 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDE6CP51160 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDE6CP51160 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
PDE6CP51160 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PDE6CP51160 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDE6CP51160 LINC01465-201ENST00000408887 1940 ntBASIC20.65■□□□□ 0.9
PDE6CP51160 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PDE6CP51160 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.64■□□□□ 0.9
PDE6CP51160 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PDE6CP51160 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PDE6CP51160 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.64■□□□□ 0.9
PDE6CP51160 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PDE6CP51160 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDE6CP51160 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.64■□□□□ 0.89
PDE6CP51160 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PDE6CP51160 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDE6CP51160 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
PDE6CP51160 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PDE6CP51160 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PDE6CP51160 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PDE6CP51160 BX088651.1-201ENST00000540551 451 ntBASIC20.64■□□□□ 0.89
PDE6CP51160 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.64■□□□□ 0.89
PDE6CP51160 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PDE6CP51160 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
PDE6CP51160 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.64■□□□□ 0.89
PDE6CP51160 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDE6CP51160 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDE6CP51160 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDE6CP51160 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDE6CP51160 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
PDE6CP51160 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDE6CP51160 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
PDE6CP51160 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDE6CP51160 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PDE6CP51160 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PDE6CP51160 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.63■□□□□ 0.89
PDE6CP51160 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
PDE6CP51160 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDE6CP51160 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDE6CP51160 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.63■□□□□ 0.89
PDE6CP51160 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PDE6CP51160 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
PDE6CP51160 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.63■□□□□ 0.89
PDE6CP51160 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDE6CP51160 AL355355.2-201ENST00000442321 338 ntBASIC20.63■□□□□ 0.89
PDE6CP51160 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.63■□□□□ 0.89
PDE6CP51160 CD177P1-201ENST00000606252 935 ntBASIC20.63■□□□□ 0.89
PDE6CP51160 AC026471.5-201ENST00000615068 467 ntBASIC20.63■□□□□ 0.89
PDE6CP51160 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PDE6CP51160 REXO1L12P-201ENST00000622156 912 ntBASIC20.63■□□□□ 0.89
PDE6CP51160 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.63■□□□□ 0.89
PDE6CP51160 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.63■□□□□ 0.89
PDE6CP51160 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.63■□□□□ 0.89
PDE6CP51160 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDE6CP51160 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDE6CP51160 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PDE6CP51160 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDE6CP51160 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PDE6CP51160 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDE6CP51160 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
PDE6CP51160 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDE6CP51160 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PDE6CP51160 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDE6CP51160 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.62■□□□□ 0.89
PDE6CP51160 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDE6CP51160 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.62■□□□□ 0.89
PDE6CP51160 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.62■□□□□ 0.89
PDE6CP51160 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDE6CP51160 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDE6CP51160 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
PDE6CP51160 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDE6CP51160 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.62■□□□□ 0.89
PDE6CP51160 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDE6CP51160 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.62■□□□□ 0.89
PDE6CP51160 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDE6CP51160 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.62■□□□□ 0.89
PDE6CP51160 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.62■□□□□ 0.89
PDE6CP51160 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.62■□□□□ 0.89
PDE6CP51160 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDE6CP51160 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDE6CP51160 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.62■□□□□ 0.89
PDE6CP51160 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.61■□□□□ 0.89
PDE6CP51160 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.61■□□□□ 0.89
PDE6CP51160 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.61■□□□□ 0.89
PDE6CP51160 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms