Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.76■□□□□ 0.43
RNF144AP50876 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
RNF144AP50876 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
RNF144AP50876 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.76■□□□□ 0.43
RNF144AP50876 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.76■□□□□ 0.43
RNF144AP50876 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNF144AP50876 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF144AP50876 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF144AP50876 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF144AP50876 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.76■□□□□ 0.43
RNF144AP50876 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
RNF144AP50876 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.75■□□□□ 0.43
RNF144AP50876 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF144AP50876 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
RNF144AP50876 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.75■□□□□ 0.43
RNF144AP50876 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.75■□□□□ 0.43
RNF144AP50876 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF144AP50876 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF144AP50876 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNF144AP50876 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF144AP50876 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.75■□□□□ 0.43
RNF144AP50876 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
RNF144AP50876 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.75■□□□□ 0.43
RNF144AP50876 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF144AP50876 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.75■□□□□ 0.43
RNF144AP50876 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
RNF144AP50876 ABHD17AP1-201ENST00000358206 933 ntBASIC17.75■□□□□ 0.43
RNF144AP50876 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF144AP50876 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
RNF144AP50876 AL158047.1-201ENST00000445918 881 ntBASIC17.75■□□□□ 0.43
RNF144AP50876 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNF144AP50876 AC098590.1-201ENST00000468126 897 ntBASIC17.75■□□□□ 0.43
RNF144AP50876 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.75■□□□□ 0.43
RNF144AP50876 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.75■□□□□ 0.43
RNF144AP50876 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.75■□□□□ 0.43
RNF144AP50876 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.75■□□□□ 0.43
RNF144AP50876 C1QL1P1-201ENST00000568105 661 ntBASIC17.75■□□□□ 0.43
RNF144AP50876 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
RNF144AP50876 FAM197Y4-202ENST00000622692 608 ntBASIC17.75■□□□□ 0.43
RNF144AP50876 HLA-A-209ENST00000638375 975 ntBASIC17.75■□□□□ 0.43
RNF144AP50876 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
RNF144AP50876 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF144AP50876 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
RNF144AP50876 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
RNF144AP50876 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF144AP50876 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
RNF144AP50876 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.75■□□□□ 0.43
RNF144AP50876 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNF144AP50876 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.75■□□□□ 0.43
RNF144AP50876 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.75■□□□□ 0.43
RNF144AP50876 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.75■□□□□ 0.43
RNF144AP50876 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF144AP50876 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
RNF144AP50876 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF144AP50876 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF144AP50876 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF144AP50876 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF144AP50876 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF144AP50876 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF144AP50876 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF144AP50876 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF144AP50876 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF144AP50876 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF144AP50876 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF144AP50876 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RNF144AP50876 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF144AP50876 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
RNF144AP50876 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF144AP50876 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF144AP50876 ITM2C-210ENST00000620962 501 ntBASIC17.74■□□□□ 0.43
RNF144AP50876 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.74■□□□□ 0.43
RNF144AP50876 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF144AP50876 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF144AP50876 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF144AP50876 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF144AP50876 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF144AP50876 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RNF144AP50876 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF144AP50876 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF144AP50876 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF144AP50876 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF144AP50876 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF144AP50876 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF144AP50876 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF144AP50876 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.74■□□□□ 0.43
RNF144AP50876 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.73■□□□□ 0.43
RNF144AP50876 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.73■□□□□ 0.43
RNF144AP50876 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.73■□□□□ 0.43
RNF144AP50876 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF144AP50876 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
RNF144AP50876 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF144AP50876 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF144AP50876 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
RNF144AP50876 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF144AP50876 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
RNF144AP50876 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
RNF144AP50876 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF144AP50876 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF144AP50876 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF144AP50876 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms