Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.51■□□□□ 0.39
SLC9A3P48764 AL121829.2-201ENST00000620908 328 ntBASIC17.51■□□□□ 0.39
SLC9A3P48764 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC9A3P48764 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC9A3P48764 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC9A3P48764 TEX21P-204ENST00000641479 1693 ntBASIC17.51■□□□□ 0.39
SLC9A3P48764 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC9A3P48764 CROCCP3-202ENST00000420820 1947 ntBASIC17.51■□□□□ 0.39
SLC9A3P48764 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.51■□□□□ 0.39
SLC9A3P48764 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC9A3P48764 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC9A3P48764 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC9A3P48764 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC9A3P48764 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SLC9A3P48764 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC9A3P48764 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC9A3P48764 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC9A3P48764 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC9A3P48764 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC9A3P48764 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC9A3P48764 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC9A3P48764 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC9A3P48764 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.5■□□□□ 0.39
SLC9A3P48764 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.5■□□□□ 0.39
SLC9A3P48764 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SLC9A3P48764 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SLC9A3P48764 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.5■□□□□ 0.39
SLC9A3P48764 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.5■□□□□ 0.39
SLC9A3P48764 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.5■□□□□ 0.39
SLC9A3P48764 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.5■□□□□ 0.39
SLC9A3P48764 AC120498.8-201ENST00000614275 531 ntBASIC17.5■□□□□ 0.39
SLC9A3P48764 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC9A3P48764 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC9A3P48764 AC005332.8-201ENST00000622750 2735 ntBASIC17.5■□□□□ 0.39
SLC9A3P48764 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC9A3P48764 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.5■□□□□ 0.39
SLC9A3P48764 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.5■□□□□ 0.39
SLC9A3P48764 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC9A3P48764 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SLC9A3P48764 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SLC9A3P48764 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC9A3P48764 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC9A3P48764 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC9A3P48764 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SLC9A3P48764 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC9A3P48764 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.49■□□□□ 0.39
SLC9A3P48764 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC9A3P48764 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC9A3P48764 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.49■□□□□ 0.39
SLC9A3P48764 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC9A3P48764 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
SLC9A3P48764 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC9A3P48764 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC9A3P48764 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC9A3P48764 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC9A3P48764 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC9A3P48764 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC9A3P48764 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC9A3P48764 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.49■□□□□ 0.39
SLC9A3P48764 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.49■□□□□ 0.39
SLC9A3P48764 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
SLC9A3P48764 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.49■□□□□ 0.39
SLC9A3P48764 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.49■□□□□ 0.39
SLC9A3P48764 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.49■□□□□ 0.39
SLC9A3P48764 AL138781.1-201ENST00000566567 1274 ntBASIC17.49■□□□□ 0.39
SLC9A3P48764 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.49■□□□□ 0.39
SLC9A3P48764 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC9A3P48764 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC9A3P48764 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC9A3P48764 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC9A3P48764 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.49■□□□□ 0.39
SLC9A3P48764 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SLC9A3P48764 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC9A3P48764 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC9A3P48764 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.49■□□□□ 0.39
SLC9A3P48764 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC9A3P48764 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC9A3P48764 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC9A3P48764 AL161938.1-201ENST00000569833 2180 ntBASIC17.49■□□□□ 0.39
SLC9A3P48764 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC9A3P48764 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.49■□□□□ 0.39
SLC9A3P48764 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.49■□□□□ 0.39
SLC9A3P48764 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC9A3P48764 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC9A3P48764 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLC9A3P48764 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC9A3P48764 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC9A3P48764 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.48■□□□□ 0.39
SLC9A3P48764 AC104417.2-201ENST00000562989 1793 ntBASIC17.48■□□□□ 0.39
SLC9A3P48764 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLC9A3P48764 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC9A3P48764 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.48■□□□□ 0.39
SLC9A3P48764 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SLC9A3P48764 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
SLC9A3P48764 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC9A3P48764 KRT18P16-201ENST00000510337 1294 ntBASIC17.48■□□□□ 0.39
SLC9A3P48764 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.48■□□□□ 0.39
SLC9A3P48764 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.48■□□□□ 0.39
SLC9A3P48764 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.48■□□□□ 0.39
SLC9A3P48764 AC098934.4-201ENST00000564127 592 ntBASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms