Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MDH1P40925 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
MDH1P40925 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
MDH1P40925 AC018553.1-201ENST00000616682 1458 ntBASIC19.22■□□□□ 0.67
MDH1P40925 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MDH1P40925 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MDH1P40925 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
MDH1P40925 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
MDH1P40925 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MDH1P40925 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
MDH1P40925 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MDH1P40925 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MDH1P40925 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MDH1P40925 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MDH1P40925 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MDH1P40925 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
MDH1P40925 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
MDH1P40925 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
MDH1P40925 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MDH1P40925 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MDH1P40925 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MDH1P40925 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
MDH1P40925 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.21■□□□□ 0.67
MDH1P40925 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.21■□□□□ 0.67
MDH1P40925 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.21■□□□□ 0.67
MDH1P40925 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
MDH1P40925 AC124067.4-201ENST00000519691 2379 ntBASIC19.21■□□□□ 0.67
MDH1P40925 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.21■□□□□ 0.67
MDH1P40925 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
MDH1P40925 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
MDH1P40925 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.21■□□□□ 0.67
MDH1P40925 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.21■□□□□ 0.67
MDH1P40925 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MDH1P40925 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
MDH1P40925 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
MDH1P40925 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MDH1P40925 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MDH1P40925 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MDH1P40925 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
MDH1P40925 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
MDH1P40925 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.2■□□□□ 0.66
MDH1P40925 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MDH1P40925 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.2■□□□□ 0.66
MDH1P40925 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MDH1P40925 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MDH1P40925 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
MDH1P40925 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.2■□□□□ 0.66
MDH1P40925 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MDH1P40925 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MDH1P40925 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.2■□□□□ 0.66
MDH1P40925 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.2■□□□□ 0.66
MDH1P40925 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MDH1P40925 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
MDH1P40925 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.2■□□□□ 0.66
MDH1P40925 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MDH1P40925 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
MDH1P40925 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.2■□□□□ 0.66
MDH1P40925 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MDH1P40925 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MDH1P40925 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MDH1P40925 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MDH1P40925 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
MDH1P40925 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MDH1P40925 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.19■□□□□ 0.66
MDH1P40925 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
MDH1P40925 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
MDH1P40925 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
MDH1P40925 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
MDH1P40925 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.19■□□□□ 0.66
MDH1P40925 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
MDH1P40925 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
MDH1P40925 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MDH1P40925 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
MDH1P40925 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MDH1P40925 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.19■□□□□ 0.66
MDH1P40925 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
MDH1P40925 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MDH1P40925 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
MDH1P40925 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MDH1P40925 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
MDH1P40925 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.19■□□□□ 0.66
MDH1P40925 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MDH1P40925 FEM1AP3-201ENST00000403722 1741 ntBASIC19.19■□□□□ 0.66
MDH1P40925 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
MDH1P40925 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
MDH1P40925 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
MDH1P40925 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
MDH1P40925 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.18■□□□□ 0.66
MDH1P40925 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MDH1P40925 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.18■□□□□ 0.66
MDH1P40925 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
MDH1P40925 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.18■□□□□ 0.66
MDH1P40925 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MDH1P40925 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MDH1P40925 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MDH1P40925 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MDH1P40925 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
MDH1P40925 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.18■□□□□ 0.66
MDH1P40925 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MDH1P40925 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms