Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.91■□□□□ 0.94
KRT9P35527 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
KRT9P35527 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
KRT9P35527 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.91■□□□□ 0.94
KRT9P35527 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.91■□□□□ 0.94
KRT9P35527 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
KRT9P35527 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KRT9P35527 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.91■□□□□ 0.94
KRT9P35527 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KRT9P35527 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
KRT9P35527 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT9P35527 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
KRT9P35527 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT9P35527 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT9P35527 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.9■□□□□ 0.94
KRT9P35527 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.9■□□□□ 0.94
KRT9P35527 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT9P35527 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
KRT9P35527 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.9■□□□□ 0.94
KRT9P35527 AC093525.10-201ENST00000625130 1569 ntBASIC20.9■□□□□ 0.94
KRT9P35527 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
KRT9P35527 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT9P35527 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT9P35527 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT9P35527 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT9P35527 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
KRT9P35527 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
KRT9P35527 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.9■□□□□ 0.94
KRT9P35527 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.9■□□□□ 0.94
KRT9P35527 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT9P35527 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT9P35527 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT9P35527 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT9P35527 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT9P35527 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
KRT9P35527 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT9P35527 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT9P35527 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
KRT9P35527 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
KRT9P35527 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT9P35527 Z98044.1-201ENST00000632503 1764 ntBASIC20.9■□□□□ 0.94
KRT9P35527 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT9P35527 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT9P35527 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.89■□□□□ 0.94
KRT9P35527 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
KRT9P35527 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
KRT9P35527 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
KRT9P35527 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
KRT9P35527 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.89■□□□□ 0.94
KRT9P35527 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
KRT9P35527 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KRT9P35527 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KRT9P35527 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KRT9P35527 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.89■□□□□ 0.93
KRT9P35527 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.89■□□□□ 0.93
KRT9P35527 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.89■□□□□ 0.93
KRT9P35527 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
KRT9P35527 IRX1P1-201ENST00000438849 1838 ntBASIC20.89■□□□□ 0.93
KRT9P35527 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KRT9P35527 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KRT9P35527 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KRT9P35527 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KRT9P35527 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
KRT9P35527 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.88■□□□□ 0.93
KRT9P35527 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KRT9P35527 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KRT9P35527 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
KRT9P35527 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
KRT9P35527 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KRT9P35527 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
KRT9P35527 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
KRT9P35527 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
KRT9P35527 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KRT9P35527 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KRT9P35527 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.88■□□□□ 0.93
KRT9P35527 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.88■□□□□ 0.93
KRT9P35527 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.88■□□□□ 0.93
KRT9P35527 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.88■□□□□ 0.93
KRT9P35527 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.88■□□□□ 0.93
KRT9P35527 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
KRT9P35527 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
KRT9P35527 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KRT9P35527 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.88■□□□□ 0.93
KRT9P35527 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.88■□□□□ 0.93
KRT9P35527 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
KRT9P35527 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.88■□□□□ 0.93
KRT9P35527 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KRT9P35527 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KRT9P35527 AC005082.1-201ENST00000413042 2259 ntBASIC20.88■□□□□ 0.93
KRT9P35527 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.88■□□□□ 0.93
KRT9P35527 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KRT9P35527 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.87■□□□□ 0.93
KRT9P35527 KRT8P8-201ENST00000434750 1448 ntBASIC20.87■□□□□ 0.93
KRT9P35527 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KRT9P35527 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KRT9P35527 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KRT9P35527 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
KRT9P35527 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KRT9P35527 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KRT9P35527 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms