Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
THBS4P35443 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
THBS4P35443 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.81■□□□□ 0.28
THBS4P35443 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.81■□□□□ 0.28
THBS4P35443 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.81■□□□□ 0.28
THBS4P35443 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
THBS4P35443 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
THBS4P35443 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
THBS4P35443 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
THBS4P35443 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
THBS4P35443 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
THBS4P35443 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.81■□□□□ 0.28
THBS4P35443 NIFKP9-201ENST00000419265 221 ntBASIC16.81■□□□□ 0.28
THBS4P35443 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
THBS4P35443 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.81■□□□□ 0.28
THBS4P35443 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.81■□□□□ 0.28
THBS4P35443 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.81■□□□□ 0.28
THBS4P35443 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.81■□□□□ 0.28
THBS4P35443 CR392000.1-201ENST00000624770 1228 ntBASIC16.81■□□□□ 0.28
THBS4P35443 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
THBS4P35443 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
THBS4P35443 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.81■□□□□ 0.28
THBS4P35443 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
THBS4P35443 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
THBS4P35443 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.81■□□□□ 0.28
THBS4P35443 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
THBS4P35443 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.81■□□□□ 0.28
THBS4P35443 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.81■□□□□ 0.28
THBS4P35443 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
THBS4P35443 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
THBS4P35443 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
THBS4P35443 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
THBS4P35443 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
THBS4P35443 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
THBS4P35443 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.8■□□□□ 0.28
THBS4P35443 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
THBS4P35443 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
THBS4P35443 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
THBS4P35443 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
THBS4P35443 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
THBS4P35443 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
THBS4P35443 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
THBS4P35443 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
THBS4P35443 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
THBS4P35443 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
THBS4P35443 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.8■□□□□ 0.28
THBS4P35443 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
THBS4P35443 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
THBS4P35443 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
THBS4P35443 AL355355.2-201ENST00000442321 338 ntBASIC16.8■□□□□ 0.28
THBS4P35443 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
THBS4P35443 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.8■□□□□ 0.28
THBS4P35443 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
THBS4P35443 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
THBS4P35443 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
THBS4P35443 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
THBS4P35443 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
THBS4P35443 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
THBS4P35443 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
THBS4P35443 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.8■□□□□ 0.28
THBS4P35443 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
THBS4P35443 AC120498.9-201ENST00000339021 3867 ntBASIC16.8■□□□□ 0.28
THBS4P35443 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
THBS4P35443 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
THBS4P35443 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
THBS4P35443 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
THBS4P35443 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
THBS4P35443 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
THBS4P35443 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
THBS4P35443 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
THBS4P35443 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
THBS4P35443 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
THBS4P35443 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
THBS4P35443 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.79■□□□□ 0.28
THBS4P35443 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.79■□□□□ 0.28
THBS4P35443 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.79■□□□□ 0.28
THBS4P35443 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
THBS4P35443 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
THBS4P35443 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
THBS4P35443 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
THBS4P35443 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
THBS4P35443 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
THBS4P35443 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
THBS4P35443 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
THBS4P35443 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.79■□□□□ 0.28
THBS4P35443 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
THBS4P35443 KSR1P1-201ENST00000446298 240 ntBASIC16.79■□□□□ 0.28
THBS4P35443 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
THBS4P35443 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
THBS4P35443 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.79■□□□□ 0.28
THBS4P35443 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
THBS4P35443 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.79■□□□□ 0.28
THBS4P35443 AC026471.5-201ENST00000615068 467 ntBASIC16.79■□□□□ 0.28
THBS4P35443 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
THBS4P35443 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.79■□□□□ 0.28
THBS4P35443 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
THBS4P35443 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
THBS4P35443 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
THBS4P35443 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
THBS4P35443 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms