Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ABCD3P28288 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
ABCD3P28288 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ABCD3P28288 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.62■□□□□ 0.41
ABCD3P28288 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
ABCD3P28288 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ABCD3P28288 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ABCD3P28288 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.62■□□□□ 0.41
ABCD3P28288 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.62■□□□□ 0.41
ABCD3P28288 BX088651.1-201ENST00000540551 451 ntBASIC17.62■□□□□ 0.41
ABCD3P28288 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ABCD3P28288 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ABCD3P28288 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ABCD3P28288 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.62■□□□□ 0.41
ABCD3P28288 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
ABCD3P28288 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
ABCD3P28288 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ABCD3P28288 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.62■□□□□ 0.41
ABCD3P28288 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
ABCD3P28288 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ABCD3P28288 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ABCD3P28288 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
ABCD3P28288 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ABCD3P28288 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ABCD3P28288 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ABCD3P28288 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
ABCD3P28288 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
ABCD3P28288 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.61■□□□□ 0.41
ABCD3P28288 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ABCD3P28288 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ABCD3P28288 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
ABCD3P28288 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
ABCD3P28288 MIR1238-201ENST00000408483 83 ntBASIC17.61■□□□□ 0.41
ABCD3P28288 CRYGFP-201ENST00000418459 633 ntBASIC17.61■□□□□ 0.41
ABCD3P28288 MFAP1P1-201ENST00000442257 1255 ntBASIC17.61■□□□□ 0.41
ABCD3P28288 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.61■□□□□ 0.41
ABCD3P28288 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.61■□□□□ 0.41
ABCD3P28288 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
ABCD3P28288 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.61■□□□□ 0.41
ABCD3P28288 FITM1-202ENST00000559294 800 ntBASIC17.61■□□□□ 0.41
ABCD3P28288 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.61■□□□□ 0.41
ABCD3P28288 CKBP1-201ENST00000565489 1086 ntBASIC17.61■□□□□ 0.41
ABCD3P28288 AP005242.2-201ENST00000580065 1175 ntBASIC17.61■□□□□ 0.41
ABCD3P28288 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.61■□□□□ 0.41
ABCD3P28288 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ABCD3P28288 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.61■□□□□ 0.41
ABCD3P28288 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ABCD3P28288 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ABCD3P28288 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ABCD3P28288 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.61■□□□□ 0.41
ABCD3P28288 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.6■□□□□ 0.41
ABCD3P28288 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.6■□□□□ 0.41
ABCD3P28288 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
ABCD3P28288 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ABCD3P28288 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ABCD3P28288 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ABCD3P28288 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ABCD3P28288 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ABCD3P28288 AL390955.1-201ENST00000428694 934 ntBASIC17.6■□□□□ 0.41
ABCD3P28288 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.6■□□□□ 0.41
ABCD3P28288 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ABCD3P28288 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ABCD3P28288 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ABCD3P28288 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.6■□□□□ 0.41
ABCD3P28288 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.6■□□□□ 0.41
ABCD3P28288 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
ABCD3P28288 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.6■□□□□ 0.41
ABCD3P28288 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ABCD3P28288 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ABCD3P28288 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ABCD3P28288 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ABCD3P28288 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ABCD3P28288 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ABCD3P28288 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
ABCD3P28288 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ABCD3P28288 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ABCD3P28288 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
ABCD3P28288 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ABCD3P28288 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.59■□□□□ 0.41
ABCD3P28288 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ABCD3P28288 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
ABCD3P28288 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.59■□□□□ 0.41
ABCD3P28288 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
ABCD3P28288 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ABCD3P28288 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ABCD3P28288 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
ABCD3P28288 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.59■□□□□ 0.41
ABCD3P28288 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.59■□□□□ 0.41
ABCD3P28288 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
ABCD3P28288 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.59■□□□□ 0.41
ABCD3P28288 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.59■□□□□ 0.41
ABCD3P28288 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.59■□□□□ 0.41
ABCD3P28288 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ABCD3P28288 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ABCD3P28288 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.59■□□□□ 0.41
ABCD3P28288 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.59■□□□□ 0.41
ABCD3P28288 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ABCD3P28288 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
ABCD3P28288 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ABCD3P28288 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms