Protein–RNA interactions for Protein: P27449

ATP6V0C, V-type proton ATPase 16 kDa proteolipid subunit, humanhuman

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0CP27449 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
ATP6V0CP27449 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
ATP6V0CP27449 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC15.3■□□□□ 0.04
ATP6V0CP27449 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
ATP6V0CP27449 AC019069.1-201ENST00000610008 1333 ntBASIC15.3■□□□□ 0.04
ATP6V0CP27449 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ATP6V0CP27449 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
ATP6V0CP27449 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC15.3■□□□□ 0.04
ATP6V0CP27449 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC15.3■□□□□ 0.04
ATP6V0CP27449 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATP6V0CP27449 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATP6V0CP27449 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATP6V0CP27449 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATP6V0CP27449 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATP6V0CP27449 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATP6V0CP27449 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.3■□□□□ 0.04
ATP6V0CP27449 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP6V0CP27449 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.29■□□□□ 0.04
ATP6V0CP27449 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATP6V0CP27449 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
ATP6V0CP27449 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC15.29■□□□□ 0.04
ATP6V0CP27449 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC15.29■□□□□ 0.04
ATP6V0CP27449 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP6V0CP27449 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP6V0CP27449 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATP6V0CP27449 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC15.29■□□□□ 0.04
ATP6V0CP27449 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATP6V0CP27449 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.29■□□□□ 0.04
ATP6V0CP27449 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP6V0CP27449 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATP6V0CP27449 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC15.29■□□□□ 0.04
ATP6V0CP27449 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
ATP6V0CP27449 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC15.29■□□□□ 0.04
ATP6V0CP27449 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP6V0CP27449 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATP6V0CP27449 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP6V0CP27449 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.29■□□□□ 0.04
ATP6V0CP27449 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP6V0CP27449 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP6V0CP27449 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP6V0CP27449 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATP6V0CP27449 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATP6V0CP27449 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATP6V0CP27449 AP001330.3-201ENST00000520123 633 ntBASIC15.29■□□□□ 0.04
ATP6V0CP27449 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
ATP6V0CP27449 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP6V0CP27449 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP6V0CP27449 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP6V0CP27449 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP6V0CP27449 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATP6V0CP27449 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP6V0CP27449 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATP6V0CP27449 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATP6V0CP27449 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATP6V0CP27449 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP6V0CP27449 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP6V0CP27449 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC15.28■□□□□ 0.04
ATP6V0CP27449 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
ATP6V0CP27449 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
ATP6V0CP27449 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP6V0CP27449 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC15.28■□□□□ 0.04
ATP6V0CP27449 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.28■□□□□ 0.04
ATP6V0CP27449 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP6V0CP27449 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP6V0CP27449 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
ATP6V0CP27449 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP6V0CP27449 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
ATP6V0CP27449 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC15.28■□□□□ 0.04
ATP6V0CP27449 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP6V0CP27449 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP6V0CP27449 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ATP6V0CP27449 RASA4CP-201ENST00000424092 1398 ntBASIC15.28■□□□□ 0.04
ATP6V0CP27449 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP6V0CP27449 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC15.28■□□□□ 0.04
ATP6V0CP27449 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP6V0CP27449 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC15.28■□□□□ 0.04
ATP6V0CP27449 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
ATP6V0CP27449 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP6V0CP27449 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC15.28■□□□□ 0.04
ATP6V0CP27449 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC15.28■□□□□ 0.04
ATP6V0CP27449 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ATP6V0CP27449 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC15.28■□□□□ 0.04
ATP6V0CP27449 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC15.28■□□□□ 0.04
ATP6V0CP27449 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC15.28■□□□□ 0.04
ATP6V0CP27449 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC15.28■□□□□ 0.04
ATP6V0CP27449 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
ATP6V0CP27449 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
ATP6V0CP27449 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC15.28■□□□□ 0.04
ATP6V0CP27449 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC15.28■□□□□ 0.04
ATP6V0CP27449 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC15.28■□□□□ 0.04
ATP6V0CP27449 AL162741.1-201ENST00000565563 1558 ntBASIC15.28■□□□□ 0.04
ATP6V0CP27449 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC15.28■□□□□ 0.04
ATP6V0CP27449 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ATP6V0CP27449 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
ATP6V0CP27449 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATP6V0CP27449 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ATP6V0CP27449 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATP6V0CP27449 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ATP6V0CP27449 AC009053.2-201ENST00000563701 2365 ntBASIC15.27■□□□□ 0.04
ATP6V0CP27449 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms