Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
CHRNB1P11230 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHRNB1P11230 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.37■□□□□ 0.69
CHRNB1P11230 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHRNB1P11230 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHRNB1P11230 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHRNB1P11230 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHRNB1P11230 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHRNB1P11230 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHRNB1P11230 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.37■□□□□ 0.69
CHRNB1P11230 AC246785.2-201ENST00000432512 513 ntBASIC19.37■□□□□ 0.69
CHRNB1P11230 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.37■□□□□ 0.69
CHRNB1P11230 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CHRNB1P11230 AC092597.1-201ENST00000487352 616 ntBASIC19.37■□□□□ 0.69
CHRNB1P11230 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.37■□□□□ 0.69
CHRNB1P11230 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.37■□□□□ 0.69
CHRNB1P11230 MIR3652-201ENST00000579335 131 ntBASIC19.37■□□□□ 0.69
CHRNB1P11230 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.37■□□□□ 0.69
CHRNB1P11230 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHRNB1P11230 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CHRNB1P11230 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CHRNB1P11230 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHRNB1P11230 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHRNB1P11230 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.37■□□□□ 0.69
CHRNB1P11230 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHRNB1P11230 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHRNB1P11230 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.37■□□□□ 0.69
CHRNB1P11230 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.36■□□□□ 0.69
CHRNB1P11230 AC009237.14-201ENST00000609975 1594 ntBASIC19.36■□□□□ 0.69
CHRNB1P11230 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CHRNB1P11230 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHRNB1P11230 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.36■□□□□ 0.69
CHRNB1P11230 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.36■□□□□ 0.69
CHRNB1P11230 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.36■□□□□ 0.69
CHRNB1P11230 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.36■□□□□ 0.69
CHRNB1P11230 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.36■□□□□ 0.69
CHRNB1P11230 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.36■□□□□ 0.69
CHRNB1P11230 RASA4DP-201ENST00000460726 1199 ntBASIC19.36■□□□□ 0.69
CHRNB1P11230 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
CHRNB1P11230 AC092329.2-201ENST00000598402 547 ntBASIC19.36■□□□□ 0.69
CHRNB1P11230 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHRNB1P11230 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.36■□□□□ 0.69
CHRNB1P11230 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CHRNB1P11230 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHRNB1P11230 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHRNB1P11230 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHRNB1P11230 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.36■□□□□ 0.69
CHRNB1P11230 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CHRNB1P11230 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.35■□□□□ 0.69
CHRNB1P11230 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.35■□□□□ 0.69
CHRNB1P11230 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHRNB1P11230 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHRNB1P11230 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHRNB1P11230 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CHRNB1P11230 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHRNB1P11230 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.35■□□□□ 0.69
CHRNB1P11230 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.35■□□□□ 0.69
CHRNB1P11230 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.35■□□□□ 0.69
CHRNB1P11230 RN7SL510P-201ENST00000581311 263 ntBASIC19.35■□□□□ 0.69
CHRNB1P11230 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CHRNB1P11230 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHRNB1P11230 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHRNB1P11230 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHRNB1P11230 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.35■□□□□ 0.69
CHRNB1P11230 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHRNB1P11230 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.35■□□□□ 0.69
CHRNB1P11230 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CHRNB1P11230 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNB1P11230 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CHRNB1P11230 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNB1P11230 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.34■□□□□ 0.69
CHRNB1P11230 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNB1P11230 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.34■□□□□ 0.69
CHRNB1P11230 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNB1P11230 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CHRNB1P11230 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNB1P11230 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
CHRNB1P11230 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNB1P11230 PRELID1P1-202ENST00000567272 903 ntBASIC19.34■□□□□ 0.69
CHRNB1P11230 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.34■□□□□ 0.69
CHRNB1P11230 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNB1P11230 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNB1P11230 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.34■□□□□ 0.69
CHRNB1P11230 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNB1P11230 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNB1P11230 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CHRNB1P11230 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CHRNB1P11230 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNB1P11230 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNB1P11230 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
CHRNB1P11230 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNB1P11230 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNB1P11230 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNB1P11230 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.33■□□□□ 0.69
CHRNB1P11230 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHRNB1P11230 AC020907.5-201ENST00000624372 1936 ntBASIC19.33■□□□□ 0.69
CHRNB1P11230 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.33■□□□□ 0.69
CHRNB1P11230 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.33■□□□□ 0.69
CHRNB1P11230 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.33■□□□□ 0.69
CHRNB1P11230 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms