Protein–RNA interactions for Protein: P06028

GYPB, Glycophorin-B, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GYPBP06028 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GYPBP06028 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
GYPBP06028 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.18■□□□□ 0.34
GYPBP06028 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.17■□□□□ 0.34
GYPBP06028 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
GYPBP06028 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
GYPBP06028 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GYPBP06028 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GYPBP06028 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GYPBP06028 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
GYPBP06028 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GYPBP06028 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GYPBP06028 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
GYPBP06028 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
GYPBP06028 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GYPBP06028 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.17■□□□□ 0.34
GYPBP06028 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.17■□□□□ 0.34
GYPBP06028 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.17■□□□□ 0.34
GYPBP06028 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.17■□□□□ 0.34
GYPBP06028 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.17■□□□□ 0.34
GYPBP06028 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.17■□□□□ 0.34
GYPBP06028 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.17■□□□□ 0.34
GYPBP06028 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.17■□□□□ 0.34
GYPBP06028 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
GYPBP06028 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
GYPBP06028 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
GYPBP06028 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
GYPBP06028 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
GYPBP06028 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
GYPBP06028 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
GYPBP06028 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GYPBP06028 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
GYPBP06028 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
GYPBP06028 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
GYPBP06028 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GYPBP06028 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GYPBP06028 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
GYPBP06028 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
GYPBP06028 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GYPBP06028 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.16■□□□□ 0.34
GYPBP06028 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.16■□□□□ 0.34
GYPBP06028 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.16■□□□□ 0.34
GYPBP06028 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.16■□□□□ 0.34
GYPBP06028 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.16■□□□□ 0.34
GYPBP06028 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.16■□□□□ 0.34
GYPBP06028 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.16■□□□□ 0.34
GYPBP06028 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.16■□□□□ 0.34
GYPBP06028 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.16■□□□□ 0.34
GYPBP06028 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
GYPBP06028 AL138781.1-201ENST00000566567 1274 ntBASIC17.16■□□□□ 0.34
GYPBP06028 AC060766.5-201ENST00000590539 871 ntBASIC17.16■□□□□ 0.34
GYPBP06028 AC083880.1-201ENST00000608266 535 ntBASIC17.16■□□□□ 0.34
GYPBP06028 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GYPBP06028 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GYPBP06028 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.16■□□□□ 0.34
GYPBP06028 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
GYPBP06028 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GYPBP06028 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GYPBP06028 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.16■□□□□ 0.34
GYPBP06028 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GYPBP06028 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GYPBP06028 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
GYPBP06028 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GYPBP06028 AL031598.1-201ENST00000561511 1773 ntBASIC17.15■□□□□ 0.34
GYPBP06028 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GYPBP06028 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
GYPBP06028 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GYPBP06028 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
GYPBP06028 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
GYPBP06028 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GYPBP06028 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GYPBP06028 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
GYPBP06028 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GYPBP06028 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GYPBP06028 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GYPBP06028 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.15■□□□□ 0.34
GYPBP06028 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.15■□□□□ 0.34
GYPBP06028 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.15■□□□□ 0.34
GYPBP06028 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.15■□□□□ 0.34
GYPBP06028 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.15■□□□□ 0.34
GYPBP06028 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GYPBP06028 SOX15-203ENST00000570788 1093 ntBASIC17.15■□□□□ 0.34
GYPBP06028 AC120498.8-201ENST00000614275 531 ntBASIC17.15■□□□□ 0.34
GYPBP06028 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GYPBP06028 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GYPBP06028 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GYPBP06028 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
GYPBP06028 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
GYPBP06028 AC018470.1-201ENST00000624790 3129 ntBASIC17.15■□□□□ 0.34
GYPBP06028 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GYPBP06028 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.15■□□□□ 0.34
GYPBP06028 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GYPBP06028 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
GYPBP06028 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.14■□□□□ 0.34
GYPBP06028 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
GYPBP06028 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.14■□□□□ 0.33
GYPBP06028 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
GYPBP06028 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
GYPBP06028 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
GYPBP06028 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms