Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
TOP3BO95985 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TOP3BO95985 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
TOP3BO95985 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TOP3BO95985 UPK3BP1-201ENST00000428678 509 ntBASIC19.57■□□□□ 0.72
TOP3BO95985 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TOP3BO95985 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.57■□□□□ 0.72
TOP3BO95985 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.57■□□□□ 0.72
TOP3BO95985 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.57■□□□□ 0.72
TOP3BO95985 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TOP3BO95985 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
TOP3BO95985 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.57■□□□□ 0.72
TOP3BO95985 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TOP3BO95985 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TOP3BO95985 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.56■□□□□ 0.72
TOP3BO95985 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
TOP3BO95985 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TOP3BO95985 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TOP3BO95985 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.56■□□□□ 0.72
TOP3BO95985 SLC25A3P1-201ENST00000443844 931 ntBASIC19.56■□□□□ 0.72
TOP3BO95985 AC010947.1-201ENST00000623454 693 ntBASIC19.56■□□□□ 0.72
TOP3BO95985 NEFHP1-201ENST00000412845 2629 ntBASIC19.56■□□□□ 0.72
TOP3BO95985 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TOP3BO95985 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.56■□□□□ 0.72
TOP3BO95985 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TOP3BO95985 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TOP3BO95985 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
TOP3BO95985 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TOP3BO95985 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TOP3BO95985 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TOP3BO95985 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.55■□□□□ 0.72
TOP3BO95985 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TOP3BO95985 PHGDH-210ENST00000641115 1638 ntBASIC19.55■□□□□ 0.72
TOP3BO95985 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.55■□□□□ 0.72
TOP3BO95985 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TOP3BO95985 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.55■□□□□ 0.72
TOP3BO95985 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TOP3BO95985 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TOP3BO95985 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
TOP3BO95985 UNC93B2-201ENST00000285383 730 ntBASIC19.55■□□□□ 0.72
TOP3BO95985 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TOP3BO95985 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TOP3BO95985 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
TOP3BO95985 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TOP3BO95985 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TOP3BO95985 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.55■□□□□ 0.72
TOP3BO95985 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.55■□□□□ 0.72
TOP3BO95985 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.55■□□□□ 0.72
TOP3BO95985 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TOP3BO95985 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.55■□□□□ 0.72
TOP3BO95985 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TOP3BO95985 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TOP3BO95985 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
TOP3BO95985 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.55■□□□□ 0.72
TOP3BO95985 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
TOP3BO95985 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TOP3BO95985 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.54■□□□□ 0.72
TOP3BO95985 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
TOP3BO95985 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.54■□□□□ 0.72
TOP3BO95985 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
TOP3BO95985 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TOP3BO95985 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TOP3BO95985 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
TOP3BO95985 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TOP3BO95985 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TOP3BO95985 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
TOP3BO95985 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TOP3BO95985 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TOP3BO95985 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.54■□□□□ 0.72
TOP3BO95985 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
TOP3BO95985 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TOP3BO95985 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.54■□□□□ 0.72
TOP3BO95985 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.54■□□□□ 0.72
TOP3BO95985 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.54■□□□□ 0.72
TOP3BO95985 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.54■□□□□ 0.72
TOP3BO95985 NAPSB-206ENST00000562112 1266 ntBASIC19.54■□□□□ 0.72
TOP3BO95985 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
TOP3BO95985 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TOP3BO95985 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
TOP3BO95985 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TOP3BO95985 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
TOP3BO95985 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.54■□□□□ 0.72
TOP3BO95985 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.54■□□□□ 0.72
TOP3BO95985 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
TOP3BO95985 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TOP3BO95985 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TOP3BO95985 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TOP3BO95985 KRT18P22-201ENST00000402024 1347 ntBASIC19.53■□□□□ 0.72
TOP3BO95985 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
TOP3BO95985 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.53■□□□□ 0.72
TOP3BO95985 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TOP3BO95985 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.53■□□□□ 0.72
TOP3BO95985 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TOP3BO95985 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TOP3BO95985 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TOP3BO95985 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TOP3BO95985 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TOP3BO95985 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TOP3BO95985 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.53■□□□□ 0.72
TOP3BO95985 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms