Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.95■□□□□ 0.46
SNX4O95219 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNX4O95219 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNX4O95219 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNX4O95219 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.95■□□□□ 0.46
SNX4O95219 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.95■□□□□ 0.46
SNX4O95219 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNX4O95219 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
SNX4O95219 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNX4O95219 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SNX4O95219 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.95■□□□□ 0.46
SNX4O95219 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SNX4O95219 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNX4O95219 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNX4O95219 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.95■□□□□ 0.46
SNX4O95219 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SNX4O95219 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNX4O95219 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.95■□□□□ 0.46
SNX4O95219 HTR7P1-201ENST00000538670 1336 ntBASIC17.95■□□□□ 0.46
SNX4O95219 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.95■□□□□ 0.46
SNX4O95219 AC079598.2-202ENST00000546624 1451 ntBASIC17.95■□□□□ 0.46
SNX4O95219 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SNX4O95219 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNX4O95219 AC090340.1-201ENST00000620778 4980 ntBASIC17.94■□□□□ 0.46
SNX4O95219 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNX4O95219 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNX4O95219 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SNX4O95219 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNX4O95219 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SNX4O95219 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNX4O95219 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.94■□□□□ 0.46
SNX4O95219 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNX4O95219 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SNX4O95219 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.94■□□□□ 0.46
SNX4O95219 HCG11-201ENST00000411553 5696 ntBASIC17.94■□□□□ 0.46
SNX4O95219 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNX4O95219 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SNX4O95219 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.94■□□□□ 0.46
SNX4O95219 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
SNX4O95219 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SNX4O95219 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNX4O95219 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.94■□□□□ 0.46
SNX4O95219 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.94■□□□□ 0.46
SNX4O95219 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.94■□□□□ 0.46
SNX4O95219 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SNX4O95219 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SNX4O95219 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.94■□□□□ 0.46
SNX4O95219 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNX4O95219 Z99916.2-201ENST00000604037 246 ntBASIC17.94■□□□□ 0.46
SNX4O95219 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNX4O95219 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SNX4O95219 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SNX4O95219 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNX4O95219 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.94■□□□□ 0.46
SNX4O95219 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SNX4O95219 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SNX4O95219 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNX4O95219 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNX4O95219 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
SNX4O95219 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.93■□□□□ 0.46
SNX4O95219 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SNX4O95219 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNX4O95219 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.93■□□□□ 0.46
SNX4O95219 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNX4O95219 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNX4O95219 AC009237.14-201ENST00000609975 1594 ntBASIC17.93■□□□□ 0.46
SNX4O95219 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
SNX4O95219 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNX4O95219 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNX4O95219 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.93■□□□□ 0.46
SNX4O95219 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNX4O95219 TUBB8P6-201ENST00000436895 1288 ntBASIC17.93■□□□□ 0.46
SNX4O95219 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.93■□□□□ 0.46
SNX4O95219 KRT18P16-201ENST00000510337 1294 ntBASIC17.93■□□□□ 0.46
SNX4O95219 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.93■□□□□ 0.46
SNX4O95219 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SNX4O95219 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SNX4O95219 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.93■□□□□ 0.46
SNX4O95219 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNX4O95219 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNX4O95219 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNX4O95219 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNX4O95219 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNX4O95219 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.93■□□□□ 0.46
SNX4O95219 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNX4O95219 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.93■□□□□ 0.46
SNX4O95219 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SNX4O95219 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNX4O95219 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNX4O95219 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SNX4O95219 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.93■□□□□ 0.46
SNX4O95219 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNX4O95219 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
SNX4O95219 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SNX4O95219 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNX4O95219 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNX4O95219 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.92■□□□□ 0.46
SNX4O95219 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.92■□□□□ 0.46
SNX4O95219 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SNX4O95219 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms