Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.89■□□□□ 0.29
GMDSO60547 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.89■□□□□ 0.29
GMDSO60547 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GMDSO60547 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC16.89■□□□□ 0.29
GMDSO60547 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC16.89■□□□□ 0.29
GMDSO60547 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.89■□□□□ 0.29
GMDSO60547 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GMDSO60547 SOX15-203ENST00000570788 1093 ntBASIC16.89■□□□□ 0.29
GMDSO60547 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.89■□□□□ 0.29
GMDSO60547 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
GMDSO60547 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.89■□□□□ 0.29
GMDSO60547 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GMDSO60547 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.89■□□□□ 0.29
GMDSO60547 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.89■□□□□ 0.29
GMDSO60547 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GMDSO60547 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.89■□□□□ 0.29
GMDSO60547 AL390961.4-201ENST00000623958 2535 ntBASIC16.89■□□□□ 0.29
GMDSO60547 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GMDSO60547 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GMDSO60547 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
GMDSO60547 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GMDSO60547 PCDHB18P-201ENST00000524813 2368 ntBASIC16.88■□□□□ 0.29
GMDSO60547 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GMDSO60547 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
GMDSO60547 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.88■□□□□ 0.29
GMDSO60547 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
GMDSO60547 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
GMDSO60547 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GMDSO60547 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
GMDSO60547 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.88■□□□□ 0.29
GMDSO60547 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.88■□□□□ 0.29
GMDSO60547 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GMDSO60547 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
GMDSO60547 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GMDSO60547 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GMDSO60547 RPS2P52-201ENST00000469610 820 ntBASIC16.88■□□□□ 0.29
GMDSO60547 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC16.88■□□□□ 0.29
GMDSO60547 UNC93B4-201ENST00000505679 747 ntBASIC16.88■□□□□ 0.29
GMDSO60547 UNC93B5-201ENST00000530315 699 ntBASIC16.88■□□□□ 0.29
GMDSO60547 KRT18P6-201ENST00000555540 1265 ntBASIC16.88■□□□□ 0.29
GMDSO60547 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.88■□□□□ 0.29
GMDSO60547 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GMDSO60547 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC16.88■□□□□ 0.29
GMDSO60547 AC120498.8-201ENST00000614275 531 ntBASIC16.88■□□□□ 0.29
GMDSO60547 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GMDSO60547 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
GMDSO60547 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GMDSO60547 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GMDSO60547 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GMDSO60547 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GMDSO60547 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
GMDSO60547 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GMDSO60547 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
GMDSO60547 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GMDSO60547 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GMDSO60547 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.88■□□□□ 0.29
GMDSO60547 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GMDSO60547 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GMDSO60547 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
GMDSO60547 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
GMDSO60547 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
GMDSO60547 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
GMDSO60547 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
GMDSO60547 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC16.87■□□□□ 0.29
GMDSO60547 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
GMDSO60547 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
GMDSO60547 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GMDSO60547 GAS7-202ENST00000396115 929 ntTSL 5 BASIC16.87■□□□□ 0.29
GMDSO60547 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.87■□□□□ 0.29
GMDSO60547 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.87■□□□□ 0.29
GMDSO60547 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC16.87■□□□□ 0.29
GMDSO60547 RNA5SP413-201ENST00000516373 109 ntBASIC16.87■□□□□ 0.29
GMDSO60547 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC16.87■□□□□ 0.29
GMDSO60547 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
GMDSO60547 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GMDSO60547 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC16.87■□□□□ 0.29
GMDSO60547 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.87■□□□□ 0.29
GMDSO60547 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
GMDSO60547 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC16.87■□□□□ 0.29
GMDSO60547 AC008687.6-201ENST00000596318 630 ntBASIC16.87■□□□□ 0.29
GMDSO60547 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GMDSO60547 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.87■□□□□ 0.29
GMDSO60547 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.87■□□□□ 0.29
GMDSO60547 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GMDSO60547 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.87■□□□□ 0.29
GMDSO60547 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.87■□□□□ 0.29
GMDSO60547 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GMDSO60547 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GMDSO60547 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.86■□□□□ 0.29
GMDSO60547 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.86■□□□□ 0.29
GMDSO60547 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GMDSO60547 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GMDSO60547 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.86■□□□□ 0.29
GMDSO60547 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.86■□□□□ 0.29
GMDSO60547 AIRN-201ENST00000601203 4374 ntBASIC16.86■□□□□ 0.29
GMDSO60547 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
GMDSO60547 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.86■□□□□ 0.29
GMDSO60547 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GMDSO60547 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.86■□□□□ 0.29
GMDSO60547 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms