Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
KCNQ3O43525 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
KCNQ3O43525 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
KCNQ3O43525 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
KCNQ3O43525 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
KCNQ3O43525 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC24.57■■□□□ 1.52
KCNQ3O43525 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
KCNQ3O43525 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC24.57■■□□□ 1.52
KCNQ3O43525 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC24.57■■□□□ 1.52
KCNQ3O43525 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC24.57■■□□□ 1.52
KCNQ3O43525 COPS8-203ENST00000409334 794 ntTSL 5 BASIC24.57■■□□□ 1.52
KCNQ3O43525 TSPY21P-201ENST00000433481 731 ntBASIC24.57■■□□□ 1.52
KCNQ3O43525 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC24.57■■□□□ 1.52
KCNQ3O43525 CD320-202ENST00000537716 1119 ntTSL 2 BASIC24.57■■□□□ 1.52
KCNQ3O43525 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC24.57■■□□□ 1.52
KCNQ3O43525 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC24.57■■□□□ 1.52
KCNQ3O43525 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC24.57■■□□□ 1.52
KCNQ3O43525 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC24.57■■□□□ 1.52
KCNQ3O43525 AL031432.5-201ENST00000641059 760 ntBASIC24.57■■□□□ 1.52
KCNQ3O43525 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
KCNQ3O43525 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC24.57■■□□□ 1.52
KCNQ3O43525 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
KCNQ3O43525 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC24.57■■□□□ 1.52
KCNQ3O43525 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
KCNQ3O43525 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
KCNQ3O43525 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC24.57■■□□□ 1.52
KCNQ3O43525 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC24.56■■□□□ 1.52
KCNQ3O43525 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
KCNQ3O43525 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
KCNQ3O43525 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC24.56■■□□□ 1.52
KCNQ3O43525 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
KCNQ3O43525 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC24.56■■□□□ 1.52
KCNQ3O43525 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
KCNQ3O43525 HOMER2P1-201ENST00000455653 964 ntBASIC24.56■■□□□ 1.52
KCNQ3O43525 AL671277.2-201ENST00000458060 996 ntBASIC24.56■■□□□ 1.52
KCNQ3O43525 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC24.56■■□□□ 1.52
KCNQ3O43525 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC24.56■■□□□ 1.52
KCNQ3O43525 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
KCNQ3O43525 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
KCNQ3O43525 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
KCNQ3O43525 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
KCNQ3O43525 AL158211.5-201ENST00000623583 2518 ntBASIC24.56■■□□□ 1.52
KCNQ3O43525 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
KCNQ3O43525 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC24.55■■□□□ 1.52
KCNQ3O43525 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
KCNQ3O43525 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC24.55■■□□□ 1.52
KCNQ3O43525 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC24.55■■□□□ 1.52
KCNQ3O43525 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC24.55■■□□□ 1.52
KCNQ3O43525 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
KCNQ3O43525 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC24.55■■□□□ 1.52
KCNQ3O43525 SPDYE15P-201ENST00000424157 909 ntBASIC24.55■■□□□ 1.52
KCNQ3O43525 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC24.55■■□□□ 1.52
KCNQ3O43525 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
KCNQ3O43525 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
KCNQ3O43525 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
KCNQ3O43525 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
KCNQ3O43525 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
KCNQ3O43525 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC24.55■■□□□ 1.52
KCNQ3O43525 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
KCNQ3O43525 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
KCNQ3O43525 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
KCNQ3O43525 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC24.55■■□□□ 1.52
KCNQ3O43525 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC24.55■■□□□ 1.52
KCNQ3O43525 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC24.55■■□□□ 1.52
KCNQ3O43525 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC24.55■■□□□ 1.52
KCNQ3O43525 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
KCNQ3O43525 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC24.54■■□□□ 1.52
KCNQ3O43525 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
KCNQ3O43525 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
KCNQ3O43525 PCED1CP-201ENST00000419887 785 ntBASIC24.54■■□□□ 1.52
KCNQ3O43525 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
KCNQ3O43525 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC24.54■■□□□ 1.52
KCNQ3O43525 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC24.54■■□□□ 1.52
KCNQ3O43525 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
KCNQ3O43525 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
KCNQ3O43525 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC24.54■■□□□ 1.52
KCNQ3O43525 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC24.54■■□□□ 1.52
KCNQ3O43525 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
KCNQ3O43525 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC24.53■■□□□ 1.52
KCNQ3O43525 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
KCNQ3O43525 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
KCNQ3O43525 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
KCNQ3O43525 TEX21P-204ENST00000641479 1693 ntBASIC24.53■■□□□ 1.52
KCNQ3O43525 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC24.53■■□□□ 1.52
KCNQ3O43525 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
KCNQ3O43525 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC24.53■■□□□ 1.52
KCNQ3O43525 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
KCNQ3O43525 AL023284.2-201ENST00000405850 579 ntBASIC24.53■■□□□ 1.52
KCNQ3O43525 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC24.53■■□□□ 1.52
KCNQ3O43525 AC091076.1-201ENST00000610741 619 ntBASIC24.53■■□□□ 1.52
KCNQ3O43525 AC083849.1-201ENST00000615227 514 ntBASIC24.53■■□□□ 1.52
KCNQ3O43525 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC24.53■■□□□ 1.52
KCNQ3O43525 AL121956.5-201ENST00000625261 221 ntBASIC24.53■■□□□ 1.52
KCNQ3O43525 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC24.53■■□□□ 1.52
KCNQ3O43525 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC24.53■■□□□ 1.52
KCNQ3O43525 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
KCNQ3O43525 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC24.53■■□□□ 1.52
KCNQ3O43525 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC24.53■■□□□ 1.52
KCNQ3O43525 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
KCNQ3O43525 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms