Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RIPK2O43353 AL390719.1-204ENST00000412397 1219 ntBASIC19.43■□□□□ 0.7
RIPK2O43353 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.43■□□□□ 0.7
RIPK2O43353 AC005829.2-201ENST00000571422 1056 ntBASIC19.43■□□□□ 0.7
RIPK2O43353 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RIPK2O43353 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
RIPK2O43353 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.43■□□□□ 0.7
RIPK2O43353 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.43■□□□□ 0.7
RIPK2O43353 AC067852.2-201ENST00000590513 2313 ntBASIC19.43■□□□□ 0.7
RIPK2O43353 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RIPK2O43353 AC124283.5-201ENST00000624661 1809 ntBASIC19.43■□□□□ 0.7
RIPK2O43353 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RIPK2O43353 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RIPK2O43353 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RIPK2O43353 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RIPK2O43353 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RIPK2O43353 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RIPK2O43353 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
RIPK2O43353 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RIPK2O43353 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RIPK2O43353 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
RIPK2O43353 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.43■□□□□ 0.7
RIPK2O43353 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RIPK2O43353 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RIPK2O43353 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.43■□□□□ 0.7
RIPK2O43353 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RIPK2O43353 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RIPK2O43353 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
RIPK2O43353 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
RIPK2O43353 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.42■□□□□ 0.7
RIPK2O43353 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RIPK2O43353 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIPK2O43353 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIPK2O43353 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
RIPK2O43353 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIPK2O43353 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIPK2O43353 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RIPK2O43353 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
RIPK2O43353 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIPK2O43353 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RIPK2O43353 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RIPK2O43353 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.42■□□□□ 0.7
RIPK2O43353 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIPK2O43353 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIPK2O43353 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIPK2O43353 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIPK2O43353 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RIPK2O43353 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.42■□□□□ 0.7
RIPK2O43353 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIPK2O43353 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RIPK2O43353 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RIPK2O43353 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.41■□□□□ 0.7
RIPK2O43353 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RIPK2O43353 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RIPK2O43353 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.41■□□□□ 0.7
RIPK2O43353 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.41■□□□□ 0.7
RIPK2O43353 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RIPK2O43353 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RIPK2O43353 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RIPK2O43353 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.41■□□□□ 0.7
RIPK2O43353 KRT18P5-201ENST00000436075 1291 ntBASIC19.41■□□□□ 0.7
RIPK2O43353 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.41■□□□□ 0.7
RIPK2O43353 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.41■□□□□ 0.7
RIPK2O43353 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.41■□□□□ 0.7
RIPK2O43353 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RIPK2O43353 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.41■□□□□ 0.7
RIPK2O43353 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RIPK2O43353 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
RIPK2O43353 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RIPK2O43353 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
RIPK2O43353 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
RIPK2O43353 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
RIPK2O43353 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.41■□□□□ 0.7
RIPK2O43353 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.41■□□□□ 0.7
RIPK2O43353 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.41■□□□□ 0.7
RIPK2O43353 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RIPK2O43353 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
RIPK2O43353 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RIPK2O43353 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RIPK2O43353 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
RIPK2O43353 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RIPK2O43353 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
RIPK2O43353 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RIPK2O43353 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RIPK2O43353 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.4■□□□□ 0.7
RIPK2O43353 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RIPK2O43353 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RIPK2O43353 AC073592.3-201ENST00000625118 1834 ntBASIC19.4■□□□□ 0.7
RIPK2O43353 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RIPK2O43353 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.4■□□□□ 0.7
RIPK2O43353 YBX1P10-201ENST00000444752 975 ntBASIC19.4■□□□□ 0.7
RIPK2O43353 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RIPK2O43353 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RIPK2O43353 AC005181.1-201ENST00000604782 1256 ntBASIC19.4■□□□□ 0.7
RIPK2O43353 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RIPK2O43353 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
RIPK2O43353 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RIPK2O43353 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RIPK2O43353 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
RIPK2O43353 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.39■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms