Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC25.85■■□□□ 1.73
MSH5O43196 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC25.85■■□□□ 1.73
MSH5O43196 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC25.85■■□□□ 1.73
MSH5O43196 HES2-206ENST00000489730 730 ntTSL 2 BASIC25.85■■□□□ 1.73
MSH5O43196 AP002982.1-201ENST00000492365 877 ntBASIC25.85■■□□□ 1.73
MSH5O43196 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC25.85■■□□□ 1.73
MSH5O43196 AL021368.1-201ENST00000607490 540 ntBASIC25.85■■□□□ 1.73
MSH5O43196 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
MSH5O43196 AL121829.2-201ENST00000620908 328 ntBASIC25.85■■□□□ 1.73
MSH5O43196 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
MSH5O43196 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
MSH5O43196 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
MSH5O43196 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
MSH5O43196 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
MSH5O43196 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
MSH5O43196 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
MSH5O43196 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
MSH5O43196 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
MSH5O43196 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
MSH5O43196 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
MSH5O43196 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
MSH5O43196 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
MSH5O43196 AC083799.1-201ENST00000366451 910 ntBASIC25.84■■□□□ 1.73
MSH5O43196 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC25.84■■□□□ 1.73
MSH5O43196 F2R-202ENST00000505600 442 ntTSL 2 BASIC25.84■■□□□ 1.73
MSH5O43196 TMA16-209ENST00000513272 803 ntTSL 2 BASIC25.84■■□□□ 1.73
MSH5O43196 AC016550.3-201ENST00000515706 767 ntBASIC25.84■■□□□ 1.73
MSH5O43196 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC25.84■■□□□ 1.73
MSH5O43196 RN7SL121P-201ENST00000584223 273 ntBASIC25.84■■□□□ 1.73
MSH5O43196 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
MSH5O43196 AL162377.1-201ENST00000618844 1793 ntBASIC25.84■■□□□ 1.73
MSH5O43196 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
MSH5O43196 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
MSH5O43196 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
MSH5O43196 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC25.84■■□□□ 1.73
MSH5O43196 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
MSH5O43196 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC25.84■■□□□ 1.73
MSH5O43196 AC124283.5-201ENST00000624661 1809 ntBASIC25.84■■□□□ 1.73
MSH5O43196 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
MSH5O43196 AC040160.2-201ENST00000623816 1675 ntBASIC25.83■■□□□ 1.73
MSH5O43196 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
MSH5O43196 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
MSH5O43196 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC25.83■■□□□ 1.73
MSH5O43196 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
MSH5O43196 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
MSH5O43196 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
MSH5O43196 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
MSH5O43196 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
MSH5O43196 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
MSH5O43196 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC25.83■■□□□ 1.73
MSH5O43196 SLC25A3P1-201ENST00000443844 931 ntBASIC25.83■■□□□ 1.73
MSH5O43196 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC25.83■■□□□ 1.73
MSH5O43196 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC25.83■■□□□ 1.73
MSH5O43196 AC022306.2-201ENST00000617563 647 ntBASIC25.83■■□□□ 1.73
MSH5O43196 AC106795.5-201ENST00000623288 454 ntBASIC25.83■■□□□ 1.73
MSH5O43196 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
MSH5O43196 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.73
MSH5O43196 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC25.83■■□□□ 1.73
MSH5O43196 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
MSH5O43196 AC006128.1-201ENST00000624704 1661 ntBASIC25.83■■□□□ 1.73
MSH5O43196 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.72
MSH5O43196 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
MSH5O43196 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
MSH5O43196 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
MSH5O43196 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
MSH5O43196 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.72
MSH5O43196 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.72
MSH5O43196 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
MSH5O43196 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
MSH5O43196 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC25.82■■□□□ 1.72
MSH5O43196 LRRIQ3-203ENST00000370911 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
MSH5O43196 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
MSH5O43196 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
MSH5O43196 PLK5-205ENST00000642079 1969 ntBASIC25.82■■□□□ 1.72
MSH5O43196 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC25.82■■□□□ 1.72
MSH5O43196 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
MSH5O43196 AL512408.1-201ENST00000569378 2000 ntBASIC25.82■■□□□ 1.72
MSH5O43196 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
MSH5O43196 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
MSH5O43196 MTCYBP11-201ENST00000447254 1109 ntBASIC25.82■■□□□ 1.72
MSH5O43196 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC25.82■■□□□ 1.72
MSH5O43196 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC25.82■■□□□ 1.72
MSH5O43196 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC25.82■■□□□ 1.72
MSH5O43196 AC146944.4-201ENST00000602697 718 ntBASIC25.82■■□□□ 1.72
MSH5O43196 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC25.82■■□□□ 1.72
MSH5O43196 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC25.82■■□□□ 1.72
MSH5O43196 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
MSH5O43196 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC25.82■■□□□ 1.72
MSH5O43196 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC25.82■■□□□ 1.72
MSH5O43196 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
MSH5O43196 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC25.82■■□□□ 1.72
MSH5O43196 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC25.82■■□□□ 1.72
MSH5O43196 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
MSH5O43196 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
MSH5O43196 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
MSH5O43196 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
MSH5O43196 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
MSH5O43196 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC25.81■■□□□ 1.72
MSH5O43196 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
MSH5O43196 RWDD4P1-201ENST00000488019 565 ntBASIC25.81■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms