Protein–RNA interactions for Protein: O15118

NPC1, Niemann-Pick C1 protein, humanhuman

Predictions only

Length 1,278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1O15118 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPC1O15118 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NPC1O15118 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.31■□□□□ 0.68
NPC1O15118 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NPC1O15118 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.31■□□□□ 0.68
NPC1O15118 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPC1O15118 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPC1O15118 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.31■□□□□ 0.68
NPC1O15118 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.31■□□□□ 0.68
NPC1O15118 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPC1O15118 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NPC1O15118 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPC1O15118 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPC1O15118 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPC1O15118 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NPC1O15118 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.3■□□□□ 0.68
NPC1O15118 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.3■□□□□ 0.68
NPC1O15118 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.3■□□□□ 0.68
NPC1O15118 TSPY23P-201ENST00000440136 739 ntBASIC19.3■□□□□ 0.68
NPC1O15118 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.3■□□□□ 0.68
NPC1O15118 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.3■□□□□ 0.68
NPC1O15118 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.3■□□□□ 0.68
NPC1O15118 AL441883.1-201ENST00000566170 1045 ntBASIC19.3■□□□□ 0.68
NPC1O15118 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
NPC1O15118 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPC1O15118 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPC1O15118 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPC1O15118 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.3■□□□□ 0.68
NPC1O15118 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NPC1O15118 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.3■□□□□ 0.68
NPC1O15118 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.3■□□□□ 0.68
NPC1O15118 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NPC1O15118 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
NPC1O15118 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPC1O15118 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPC1O15118 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
NPC1O15118 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NPC1O15118 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPC1O15118 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPC1O15118 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NPC1O15118 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPC1O15118 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.29■□□□□ 0.68
NPC1O15118 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.29■□□□□ 0.68
NPC1O15118 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
NPC1O15118 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.29■□□□□ 0.68
NPC1O15118 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.29■□□□□ 0.68
NPC1O15118 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPC1O15118 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.29■□□□□ 0.68
NPC1O15118 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NPC1O15118 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.29■□□□□ 0.68
NPC1O15118 AL023973.1-201ENST00000624619 620 ntBASIC19.29■□□□□ 0.68
NPC1O15118 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.29■□□□□ 0.68
NPC1O15118 AP000550.4-202ENST00000639755 178 ntBASIC19.29■□□□□ 0.68
NPC1O15118 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPC1O15118 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.29■□□□□ 0.68
NPC1O15118 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.29■□□□□ 0.68
NPC1O15118 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NPC1O15118 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
NPC1O15118 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NPC1O15118 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPC1O15118 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPC1O15118 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
NPC1O15118 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
NPC1O15118 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NPC1O15118 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.28■□□□□ 0.68
NPC1O15118 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.28■□□□□ 0.68
NPC1O15118 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.28■□□□□ 0.68
NPC1O15118 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.28■□□□□ 0.68
NPC1O15118 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.28■□□□□ 0.68
NPC1O15118 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NPC1O15118 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.28■□□□□ 0.68
NPC1O15118 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPC1O15118 AL358472.4-201ENST00000633140 710 ntBASIC19.28■□□□□ 0.68
NPC1O15118 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
NPC1O15118 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPC1O15118 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.28■□□□□ 0.68
NPC1O15118 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.28■□□□□ 0.68
NPC1O15118 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPC1O15118 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPC1O15118 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NPC1O15118 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPC1O15118 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPC1O15118 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NPC1O15118 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPC1O15118 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.27■□□□□ 0.68
NPC1O15118 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.27■□□□□ 0.68
NPC1O15118 AC125437.2-201ENST00000625180 2167 ntBASIC19.27■□□□□ 0.68
NPC1O15118 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
NPC1O15118 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
NPC1O15118 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.27■□□□□ 0.68
NPC1O15118 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.27■□□□□ 0.68
NPC1O15118 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.27■□□□□ 0.68
NPC1O15118 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NPC1O15118 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
NPC1O15118 AC009947.2-201ENST00000444014 672 ntBASIC19.27■□□□□ 0.68
NPC1O15118 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
NPC1O15118 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.27■□□□□ 0.68
NPC1O15118 AFG3L1P-217ENST00000557444 2447 ntBASIC19.27■□□□□ 0.68
NPC1O15118 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NPC1O15118 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms