Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SRRM3A6NNA2 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.78■□□□□ 0.76
SRRM3A6NNA2 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SRRM3A6NNA2 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SRRM3A6NNA2 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
SRRM3A6NNA2 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SRRM3A6NNA2 AL161938.1-201ENST00000569833 2180 ntBASIC19.78■□□□□ 0.76
SRRM3A6NNA2 WIZP1-201ENST00000531444 2299 ntBASIC19.78■□□□□ 0.76
SRRM3A6NNA2 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SRRM3A6NNA2 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SRRM3A6NNA2 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.78■□□□□ 0.76
SRRM3A6NNA2 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SRRM3A6NNA2 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SRRM3A6NNA2 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
SRRM3A6NNA2 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
SRRM3A6NNA2 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SRRM3A6NNA2 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SRRM3A6NNA2 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SRRM3A6NNA2 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
SRRM3A6NNA2 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SRRM3A6NNA2 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.77■□□□□ 0.76
SRRM3A6NNA2 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SRRM3A6NNA2 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SRRM3A6NNA2 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.77■□□□□ 0.76
SRRM3A6NNA2 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SRRM3A6NNA2 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SRRM3A6NNA2 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.77■□□□□ 0.76
SRRM3A6NNA2 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
SRRM3A6NNA2 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.77■□□□□ 0.76
SRRM3A6NNA2 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.77■□□□□ 0.75
SRRM3A6NNA2 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SRRM3A6NNA2 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SRRM3A6NNA2 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SRRM3A6NNA2 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
SRRM3A6NNA2 RBM17P2-201ENST00000616397 1405 ntBASIC19.76■□□□□ 0.75
SRRM3A6NNA2 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SRRM3A6NNA2 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
SRRM3A6NNA2 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.76■□□□□ 0.75
SRRM3A6NNA2 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SRRM3A6NNA2 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.76■□□□□ 0.75
SRRM3A6NNA2 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SRRM3A6NNA2 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SRRM3A6NNA2 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SRRM3A6NNA2 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SRRM3A6NNA2 Z98044.1-201ENST00000632503 1764 ntBASIC19.76■□□□□ 0.75
SRRM3A6NNA2 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.76■□□□□ 0.75
SRRM3A6NNA2 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SRRM3A6NNA2 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SRRM3A6NNA2 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SRRM3A6NNA2 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.76■□□□□ 0.75
SRRM3A6NNA2 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.76■□□□□ 0.75
SRRM3A6NNA2 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.76■□□□□ 0.75
SRRM3A6NNA2 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SRRM3A6NNA2 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SRRM3A6NNA2 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.76■□□□□ 0.75
SRRM3A6NNA2 AC113410.3-201ENST00000623366 203 ntBASIC19.76■□□□□ 0.75
SRRM3A6NNA2 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
SRRM3A6NNA2 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SRRM3A6NNA2 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SRRM3A6NNA2 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.76■□□□□ 0.75
SRRM3A6NNA2 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
SRRM3A6NNA2 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SRRM3A6NNA2 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SRRM3A6NNA2 AL135905.2-201ENST00000584934 1404 ntBASIC19.76■□□□□ 0.75
SRRM3A6NNA2 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.76■□□□□ 0.75
SRRM3A6NNA2 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SRRM3A6NNA2 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.75■□□□□ 0.75
SRRM3A6NNA2 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SRRM3A6NNA2 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.75■□□□□ 0.75
SRRM3A6NNA2 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.75■□□□□ 0.75
SRRM3A6NNA2 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SRRM3A6NNA2 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.75■□□□□ 0.75
SRRM3A6NNA2 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.75■□□□□ 0.75
SRRM3A6NNA2 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SRRM3A6NNA2 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SRRM3A6NNA2 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.75■□□□□ 0.75
SRRM3A6NNA2 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SRRM3A6NNA2 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.75■□□□□ 0.75
SRRM3A6NNA2 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.75■□□□□ 0.75
SRRM3A6NNA2 AL353708.3-201ENST00000610272 989 ntBASIC19.75■□□□□ 0.75
SRRM3A6NNA2 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.75■□□□□ 0.75
SRRM3A6NNA2 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.75■□□□□ 0.75
SRRM3A6NNA2 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.75■□□□□ 0.75
SRRM3A6NNA2 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.75■□□□□ 0.75
SRRM3A6NNA2 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SRRM3A6NNA2 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SRRM3A6NNA2 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SRRM3A6NNA2 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SRRM3A6NNA2 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
SRRM3A6NNA2 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.75■□□□□ 0.75
SRRM3A6NNA2 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SRRM3A6NNA2 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.75■□□□□ 0.75
SRRM3A6NNA2 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SRRM3A6NNA2 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SRRM3A6NNA2 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SRRM3A6NNA2 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SRRM3A6NNA2 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.74■□□□□ 0.75
SRRM3A6NNA2 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.74■□□□□ 0.75
SRRM3A6NNA2 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
SRRM3A6NNA2 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms