Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RBFOX3A6NFN3 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC15.11■□□□□ 0.01
RBFOX3A6NFN3 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.11■□□□□ 0.01
RBFOX3A6NFN3 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RBFOX3A6NFN3 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RBFOX3A6NFN3 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RBFOX3A6NFN3 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RBFOX3A6NFN3 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RBFOX3A6NFN3 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.1■□□□□ 0.01
RBFOX3A6NFN3 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RBFOX3A6NFN3 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RBFOX3A6NFN3 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RBFOX3A6NFN3 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
RBFOX3A6NFN3 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RBFOX3A6NFN3 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RBFOX3A6NFN3 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.1■□□□□ 0.01
RBFOX3A6NFN3 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RBFOX3A6NFN3 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RBFOX3A6NFN3 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
RBFOX3A6NFN3 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RBFOX3A6NFN3 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.1■□□□□ 0.01
RBFOX3A6NFN3 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RBFOX3A6NFN3 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC15.1■□□□□ 0.01
RBFOX3A6NFN3 QDPR-206ENST00000508623 601 ntTSL 3 BASIC15.1■□□□□ 0.01
RBFOX3A6NFN3 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC15.1■□□□□ 0.01
RBFOX3A6NFN3 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
RBFOX3A6NFN3 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
RBFOX3A6NFN3 AC105233.4-201ENST00000642045 216 ntBASIC15.1■□□□□ 0.01
RBFOX3A6NFN3 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RBFOX3A6NFN3 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RBFOX3A6NFN3 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RBFOX3A6NFN3 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RBFOX3A6NFN3 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
RBFOX3A6NFN3 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
RBFOX3A6NFN3 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RBFOX3A6NFN3 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RBFOX3A6NFN3 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC15.1■□□□□ 0.01
RBFOX3A6NFN3 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
RBFOX3A6NFN3 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC15.1■□□□□ 0.01
RBFOX3A6NFN3 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.1■□□□□ 0.01
RBFOX3A6NFN3 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
RBFOX3A6NFN3 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RBFOX3A6NFN3 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RBFOX3A6NFN3 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RBFOX3A6NFN3 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC15.09■□□□□ 0.01
RBFOX3A6NFN3 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
RBFOX3A6NFN3 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RBFOX3A6NFN3 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RBFOX3A6NFN3 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RBFOX3A6NFN3 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RBFOX3A6NFN3 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
RBFOX3A6NFN3 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RBFOX3A6NFN3 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RBFOX3A6NFN3 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RBFOX3A6NFN3 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RBFOX3A6NFN3 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RBFOX3A6NFN3 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC15.09■□□□□ 0.01
RBFOX3A6NFN3 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RBFOX3A6NFN3 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC15.09■□□□□ 0.01
RBFOX3A6NFN3 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC15.09■□□□□ 0.01
RBFOX3A6NFN3 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RBFOX3A6NFN3 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
RBFOX3A6NFN3 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC15.09■□□□□ 0.01
RBFOX3A6NFN3 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC15.09■□□□□ 0.01
RBFOX3A6NFN3 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RBFOX3A6NFN3 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
RBFOX3A6NFN3 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RBFOX3A6NFN3 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
RBFOX3A6NFN3 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RBFOX3A6NFN3 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RBFOX3A6NFN3 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
RBFOX3A6NFN3 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC15.09■□□□□ 0.01
RBFOX3A6NFN3 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC15.09■□□□□ 0.01
RBFOX3A6NFN3 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
RBFOX3A6NFN3 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
RBFOX3A6NFN3 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RBFOX3A6NFN3 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
RBFOX3A6NFN3 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RBFOX3A6NFN3 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC15.08■□□□□ 0.01
RBFOX3A6NFN3 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RBFOX3A6NFN3 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.08■□□□□ 0
RBFOX3A6NFN3 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RBFOX3A6NFN3 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC15.08■□□□□ 0
RBFOX3A6NFN3 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.08■□□□□ 0
RBFOX3A6NFN3 AC012317.2-201ENST00000623305 2251 ntBASIC15.08■□□□□ 0
RBFOX3A6NFN3 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
RBFOX3A6NFN3 PHGDH-210ENST00000641115 1638 ntBASIC15.08■□□□□ 0
RBFOX3A6NFN3 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC15.08■□□□□ 0
RBFOX3A6NFN3 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
RBFOX3A6NFN3 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
RBFOX3A6NFN3 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RBFOX3A6NFN3 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC15.08■□□□□ 0
RBFOX3A6NFN3 AL356652.1-201ENST00000615962 565 ntBASIC15.08■□□□□ 0
RBFOX3A6NFN3 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
RBFOX3A6NFN3 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC15.08■□□□□ 0
RBFOX3A6NFN3 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.08■□□□□ 0
RBFOX3A6NFN3 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.08■□□□□ 0
RBFOX3A6NFN3 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RBFOX3A6NFN3 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
RBFOX3A6NFN3 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms