Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC78A2IDD5 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC78A2IDD5 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC78A2IDD5 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC78A2IDD5 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
CCDC78A2IDD5 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC78A2IDD5 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CCDC78A2IDD5 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC78A2IDD5 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CCDC78A2IDD5 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC78A2IDD5 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC78A2IDD5 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC78A2IDD5 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC78A2IDD5 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CCDC78A2IDD5 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC78A2IDD5 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC78A2IDD5 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.36■□□□□ 0.69
CCDC78A2IDD5 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC78A2IDD5 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC78A2IDD5 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC78A2IDD5 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC78A2IDD5 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC78A2IDD5 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC78A2IDD5 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC78A2IDD5 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CCDC78A2IDD5 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC78A2IDD5 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC78A2IDD5 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC78A2IDD5 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC78A2IDD5 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC78A2IDD5 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC78A2IDD5 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC78A2IDD5 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC78A2IDD5 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC78A2IDD5 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC78A2IDD5 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC78A2IDD5 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC78A2IDD5 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC78A2IDD5 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC78A2IDD5 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC78A2IDD5 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CCDC78A2IDD5 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC78A2IDD5 C1QL1P1-201ENST00000568105 661 ntBASIC19.35■□□□□ 0.69
CCDC78A2IDD5 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CCDC78A2IDD5 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.35■□□□□ 0.69
CCDC78A2IDD5 HLA-A-209ENST00000638375 975 ntBASIC19.35■□□□□ 0.69
CCDC78A2IDD5 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC78A2IDD5 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CCDC78A2IDD5 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC78A2IDD5 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
CCDC78A2IDD5 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC78A2IDD5 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC78A2IDD5 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CCDC78A2IDD5 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.34■□□□□ 0.69
CCDC78A2IDD5 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC78A2IDD5 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.34■□□□□ 0.69
CCDC78A2IDD5 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CCDC78A2IDD5 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC78A2IDD5 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.34■□□□□ 0.69
CCDC78A2IDD5 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.34■□□□□ 0.69
CCDC78A2IDD5 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC78A2IDD5 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC78A2IDD5 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC78A2IDD5 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC78A2IDD5 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC78A2IDD5 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CCDC78A2IDD5 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.34■□□□□ 0.69
CCDC78A2IDD5 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC78A2IDD5 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC78A2IDD5 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC78A2IDD5 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.34■□□□□ 0.69
CCDC78A2IDD5 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.34■□□□□ 0.69
CCDC78A2IDD5 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.34■□□□□ 0.69
CCDC78A2IDD5 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC78A2IDD5 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC78A2IDD5 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC78A2IDD5 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CCDC78A2IDD5 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC78A2IDD5 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
CCDC78A2IDD5 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC78A2IDD5 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC78A2IDD5 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC78A2IDD5 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC78A2IDD5 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.33■□□□□ 0.69
CCDC78A2IDD5 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
CCDC78A2IDD5 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.33■□□□□ 0.69
CCDC78A2IDD5 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.33■□□□□ 0.69
CCDC78A2IDD5 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.33■□□□□ 0.69
CCDC78A2IDD5 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC78A2IDD5 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC78A2IDD5 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC78A2IDD5 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.33■□□□□ 0.69
CCDC78A2IDD5 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.33■□□□□ 0.69
CCDC78A2IDD5 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC78A2IDD5 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.33■□□□□ 0.69
CCDC78A2IDD5 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC78A2IDD5 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CCDC78A2IDD5 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC78A2IDD5 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC78A2IDD5 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms