Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.26■□□□□ 0.67
TCRBV9S1A1TA0A576 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TCRBV9S1A1TA0A576 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TCRBV9S1A1TA0A576 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.26■□□□□ 0.67
TCRBV9S1A1TA0A576 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TCRBV9S1A1TA0A576 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.26■□□□□ 0.67
TCRBV9S1A1TA0A576 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TCRBV9S1A1TA0A576 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.26■□□□□ 0.67
TCRBV9S1A1TA0A576 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TCRBV9S1A1TA0A576 AC079598.2-202ENST00000546624 1451 ntBASIC19.26■□□□□ 0.67
TCRBV9S1A1TA0A576 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TCRBV9S1A1TA0A576 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TCRBV9S1A1TA0A576 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TCRBV9S1A1TA0A576 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TCRBV9S1A1TA0A576 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TCRBV9S1A1TA0A576 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
TCRBV9S1A1TA0A576 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
TCRBV9S1A1TA0A576 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TCRBV9S1A1TA0A576 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
TCRBV9S1A1TA0A576 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TCRBV9S1A1TA0A576 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TCRBV9S1A1TA0A576 BICD1-207ENST00000551848 1962 ntBASIC19.25■□□□□ 0.67
TCRBV9S1A1TA0A576 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TCRBV9S1A1TA0A576 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.25■□□□□ 0.67
TCRBV9S1A1TA0A576 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.25■□□□□ 0.67
TCRBV9S1A1TA0A576 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TCRBV9S1A1TA0A576 AC098934.4-201ENST00000564127 592 ntBASIC19.25■□□□□ 0.67
TCRBV9S1A1TA0A576 SOX15-203ENST00000570788 1093 ntBASIC19.25■□□□□ 0.67
TCRBV9S1A1TA0A576 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.25■□□□□ 0.67
TCRBV9S1A1TA0A576 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.25■□□□□ 0.67
TCRBV9S1A1TA0A576 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.25■□□□□ 0.67
TCRBV9S1A1TA0A576 AC083906.6-201ENST00000641366 219 ntBASIC19.25■□□□□ 0.67
TCRBV9S1A1TA0A576 AC026471.1-201ENST00000564629 3026 ntBASIC19.25■□□□□ 0.67
TCRBV9S1A1TA0A576 AC020763.4-201ENST00000623414 4170 ntBASIC19.25■□□□□ 0.67
TCRBV9S1A1TA0A576 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.25■□□□□ 0.67
TCRBV9S1A1TA0A576 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
TCRBV9S1A1TA0A576 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TCRBV9S1A1TA0A576 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
TCRBV9S1A1TA0A576 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.25■□□□□ 0.67
TCRBV9S1A1TA0A576 ANO7L1-203ENST00000602586 1720 ntBASIC19.25■□□□□ 0.67
TCRBV9S1A1TA0A576 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TCRBV9S1A1TA0A576 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TCRBV9S1A1TA0A576 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TCRBV9S1A1TA0A576 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TCRBV9S1A1TA0A576 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TCRBV9S1A1TA0A576 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.25■□□□□ 0.67
TCRBV9S1A1TA0A576 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TCRBV9S1A1TA0A576 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TCRBV9S1A1TA0A576 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TCRBV9S1A1TA0A576 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
TCRBV9S1A1TA0A576 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TCRBV9S1A1TA0A576 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TCRBV9S1A1TA0A576 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TCRBV9S1A1TA0A576 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.24■□□□□ 0.67
TCRBV9S1A1TA0A576 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
TCRBV9S1A1TA0A576 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.24■□□□□ 0.67
TCRBV9S1A1TA0A576 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.24■□□□□ 0.67
TCRBV9S1A1TA0A576 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.24■□□□□ 0.67
TCRBV9S1A1TA0A576 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.24■□□□□ 0.67
TCRBV9S1A1TA0A576 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.24■□□□□ 0.67
TCRBV9S1A1TA0A576 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.24■□□□□ 0.67
TCRBV9S1A1TA0A576 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
TCRBV9S1A1TA0A576 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TCRBV9S1A1TA0A576 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
TCRBV9S1A1TA0A576 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
TCRBV9S1A1TA0A576 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.24■□□□□ 0.67
TCRBV9S1A1TA0A576 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TCRBV9S1A1TA0A576 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TCRBV9S1A1TA0A576 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.24■□□□□ 0.67
TCRBV9S1A1TA0A576 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.24■□□□□ 0.67
TCRBV9S1A1TA0A576 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TCRBV9S1A1TA0A576 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TCRBV9S1A1TA0A576 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TCRBV9S1A1TA0A576 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
TCRBV9S1A1TA0A576 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
TCRBV9S1A1TA0A576 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.23■□□□□ 0.67
TCRBV9S1A1TA0A576 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TCRBV9S1A1TA0A576 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TCRBV9S1A1TA0A576 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TCRBV9S1A1TA0A576 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
TCRBV9S1A1TA0A576 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TCRBV9S1A1TA0A576 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TCRBV9S1A1TA0A576 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TCRBV9S1A1TA0A576 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TCRBV9S1A1TA0A576 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TCRBV9S1A1TA0A576 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.23■□□□□ 0.67
TCRBV9S1A1TA0A576 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TCRBV9S1A1TA0A576 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.23■□□□□ 0.67
TCRBV9S1A1TA0A576 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.23■□□□□ 0.67
TCRBV9S1A1TA0A576 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.23■□□□□ 0.67
TCRBV9S1A1TA0A576 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.23■□□□□ 0.67
TCRBV9S1A1TA0A576 AC008687.6-201ENST00000596318 630 ntBASIC19.23■□□□□ 0.67
TCRBV9S1A1TA0A576 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TCRBV9S1A1TA0A576 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.23■□□□□ 0.67
TCRBV9S1A1TA0A576 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
TCRBV9S1A1TA0A576 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.23■□□□□ 0.67
TCRBV9S1A1TA0A576 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TCRBV9S1A1TA0A576 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.23■□□□□ 0.67
TCRBV9S1A1TA0A576 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.23■□□□□ 0.67
TCRBV9S1A1TA0A576 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms