Protein–RNA interactions for Protein: A0A1B0GVL6

TMEM238L, HCG1800530, isoform CRA_b, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238LA0A1B0GVL6 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM238LA0A1B0GVL6 AC019171.1-201ENST00000601251 1056 ntBASIC13.39□□□□□ -0.27
TMEM238LA0A1B0GVL6 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC13.39□□□□□ -0.27
TMEM238LA0A1B0GVL6 AC055733.4-201ENST00000638462 1354 ntBASIC13.39□□□□□ -0.27
TMEM238LA0A1B0GVL6 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC13.39□□□□□ -0.27
TMEM238LA0A1B0GVL6 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM238LA0A1B0GVL6 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM238LA0A1B0GVL6 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.39□□□□□ -0.27
TMEM238LA0A1B0GVL6 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM238LA0A1B0GVL6 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.39□□□□□ -0.27
TMEM238LA0A1B0GVL6 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM238LA0A1B0GVL6 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
TMEM238LA0A1B0GVL6 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM238LA0A1B0GVL6 FST-202ENST00000396947 2538 ntTSL 5 BASIC13.39□□□□□ -0.27
TMEM238LA0A1B0GVL6 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM238LA0A1B0GVL6 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM238LA0A1B0GVL6 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM238LA0A1B0GVL6 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC13.39□□□□□ -0.27
TMEM238LA0A1B0GVL6 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM238LA0A1B0GVL6 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM238LA0A1B0GVL6 AC126755.1-201ENST00000525846 6405 ntBASIC13.39□□□□□ -0.27
TMEM238LA0A1B0GVL6 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM238LA0A1B0GVL6 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC13.38□□□□□ -0.27
TMEM238LA0A1B0GVL6 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC13.38□□□□□ -0.27
TMEM238LA0A1B0GVL6 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC13.38□□□□□ -0.27
TMEM238LA0A1B0GVL6 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM238LA0A1B0GVL6 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM238LA0A1B0GVL6 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM238LA0A1B0GVL6 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM238LA0A1B0GVL6 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM238LA0A1B0GVL6 BX119927.1-201ENST00000636596 1552 ntBASIC13.38□□□□□ -0.27
TMEM238LA0A1B0GVL6 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
TMEM238LA0A1B0GVL6 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC13.38□□□□□ -0.27
TMEM238LA0A1B0GVL6 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC13.38□□□□□ -0.27
TMEM238LA0A1B0GVL6 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
TMEM238LA0A1B0GVL6 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM238LA0A1B0GVL6 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC13.38□□□□□ -0.27
TMEM238LA0A1B0GVL6 AC104581.4-201ENST00000623126 3052 ntBASIC13.38□□□□□ -0.27
TMEM238LA0A1B0GVL6 SPCS2P3-201ENST00000500401 656 ntBASIC13.38□□□□□ -0.27
TMEM238LA0A1B0GVL6 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC13.38□□□□□ -0.27
TMEM238LA0A1B0GVL6 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC13.38□□□□□ -0.27
TMEM238LA0A1B0GVL6 MIR3648-2-201ENST00000581792 180 ntBASIC13.38□□□□□ -0.27
TMEM238LA0A1B0GVL6 MIR3648-1-201ENST00000615959 180 ntBASIC13.38□□□□□ -0.27
TMEM238LA0A1B0GVL6 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM238LA0A1B0GVL6 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM238LA0A1B0GVL6 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC13.38□□□□□ -0.27
TMEM238LA0A1B0GVL6 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.38□□□□□ -0.27
TMEM238LA0A1B0GVL6 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC13.38□□□□□ -0.27
TMEM238LA0A1B0GVL6 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM238LA0A1B0GVL6 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TMEM238LA0A1B0GVL6 C3orf20-202ENST00000412910 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM238LA0A1B0GVL6 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM238LA0A1B0GVL6 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM238LA0A1B0GVL6 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM238LA0A1B0GVL6 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM238LA0A1B0GVL6 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM238LA0A1B0GVL6 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.38□□□□□ -0.27
TMEM238LA0A1B0GVL6 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.38□□□□□ -0.27
TMEM238LA0A1B0GVL6 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM238LA0A1B0GVL6 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC13.37□□□□□ -0.27
TMEM238LA0A1B0GVL6 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM238LA0A1B0GVL6 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM238LA0A1B0GVL6 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM238LA0A1B0GVL6 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM238LA0A1B0GVL6 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC13.37□□□□□ -0.27
TMEM238LA0A1B0GVL6 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM238LA0A1B0GVL6 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM238LA0A1B0GVL6 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
TMEM238LA0A1B0GVL6 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM238LA0A1B0GVL6 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
TMEM238LA0A1B0GVL6 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM238LA0A1B0GVL6 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
TMEM238LA0A1B0GVL6 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
TMEM238LA0A1B0GVL6 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM238LA0A1B0GVL6 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM238LA0A1B0GVL6 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM238LA0A1B0GVL6 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
TMEM238LA0A1B0GVL6 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM238LA0A1B0GVL6 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM238LA0A1B0GVL6 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM238LA0A1B0GVL6 CEP120-209ENST00000515110 606 ntTSL 3 BASIC13.37□□□□□ -0.27
TMEM238LA0A1B0GVL6 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
TMEM238LA0A1B0GVL6 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM238LA0A1B0GVL6 GOLGA2P11-201ENST00000562660 1621 ntBASIC13.37□□□□□ -0.27
TMEM238LA0A1B0GVL6 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM238LA0A1B0GVL6 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM238LA0A1B0GVL6 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
TMEM238LA0A1B0GVL6 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM238LA0A1B0GVL6 GATB-213ENST00000515812 1893 ntTSL 5 BASIC13.37□□□□□ -0.27
TMEM238LA0A1B0GVL6 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM238LA0A1B0GVL6 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC13.37□□□□□ -0.27
TMEM238LA0A1B0GVL6 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC13.37□□□□□ -0.27
TMEM238LA0A1B0GVL6 Z98044.1-201ENST00000632503 1764 ntBASIC13.37□□□□□ -0.27
TMEM238LA0A1B0GVL6 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM238LA0A1B0GVL6 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
TMEM238LA0A1B0GVL6 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM238LA0A1B0GVL6 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM238LA0A1B0GVL6 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM238LA0A1B0GVL6 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM238LA0A1B0GVL6 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms