Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC13.83□□□□□ -0.2
IGHV4-28A0A0C4DH34 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
IGHV4-28A0A0C4DH34 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
IGHV4-28A0A0C4DH34 AC010947.1-201ENST00000623454 693 ntBASIC13.83□□□□□ -0.2
IGHV4-28A0A0C4DH34 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC13.83□□□□□ -0.2
IGHV4-28A0A0C4DH34 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC13.83□□□□□ -0.2
IGHV4-28A0A0C4DH34 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
IGHV4-28A0A0C4DH34 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC13.83□□□□□ -0.2
IGHV4-28A0A0C4DH34 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
IGHV4-28A0A0C4DH34 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
IGHV4-28A0A0C4DH34 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
IGHV4-28A0A0C4DH34 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC13.83□□□□□ -0.2
IGHV4-28A0A0C4DH34 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
IGHV4-28A0A0C4DH34 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
IGHV4-28A0A0C4DH34 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC13.83□□□□□ -0.2
IGHV4-28A0A0C4DH34 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC13.83□□□□□ -0.2
IGHV4-28A0A0C4DH34 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC13.83□□□□□ -0.2
IGHV4-28A0A0C4DH34 AC096733.2-201ENST00000609937 1394 ntBASIC13.83□□□□□ -0.2
IGHV4-28A0A0C4DH34 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
IGHV4-28A0A0C4DH34 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
IGHV4-28A0A0C4DH34 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
IGHV4-28A0A0C4DH34 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
IGHV4-28A0A0C4DH34 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC13.82□□□□□ -0.2
IGHV4-28A0A0C4DH34 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
IGHV4-28A0A0C4DH34 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
IGHV4-28A0A0C4DH34 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
IGHV4-28A0A0C4DH34 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
IGHV4-28A0A0C4DH34 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC13.82□□□□□ -0.2
IGHV4-28A0A0C4DH34 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC13.82□□□□□ -0.2
IGHV4-28A0A0C4DH34 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC13.82□□□□□ -0.2
IGHV4-28A0A0C4DH34 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC13.82□□□□□ -0.2
IGHV4-28A0A0C4DH34 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC13.82□□□□□ -0.2
IGHV4-28A0A0C4DH34 AC145285.6-201ENST00000604632 637 ntBASIC13.82□□□□□ -0.2
IGHV4-28A0A0C4DH34 AC012306.2-201ENST00000609350 630 ntBASIC13.82□□□□□ -0.2
IGHV4-28A0A0C4DH34 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
IGHV4-28A0A0C4DH34 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
IGHV4-28A0A0C4DH34 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
IGHV4-28A0A0C4DH34 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC13.82□□□□□ -0.2
IGHV4-28A0A0C4DH34 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC13.82□□□□□ -0.2
IGHV4-28A0A0C4DH34 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC13.82□□□□□ -0.2
IGHV4-28A0A0C4DH34 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
IGHV4-28A0A0C4DH34 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC13.82□□□□□ -0.2
IGHV4-28A0A0C4DH34 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
IGHV4-28A0A0C4DH34 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
IGHV4-28A0A0C4DH34 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
IGHV4-28A0A0C4DH34 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
IGHV4-28A0A0C4DH34 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
IGHV4-28A0A0C4DH34 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
IGHV4-28A0A0C4DH34 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
IGHV4-28A0A0C4DH34 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
IGHV4-28A0A0C4DH34 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC13.81□□□□□ -0.2
IGHV4-28A0A0C4DH34 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
IGHV4-28A0A0C4DH34 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
IGHV4-28A0A0C4DH34 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC13.81□□□□□ -0.2
IGHV4-28A0A0C4DH34 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
IGHV4-28A0A0C4DH34 PRR31-201ENST00000371629 978 ntTSL 2 BASIC13.81□□□□□ -0.2
IGHV4-28A0A0C4DH34 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC13.81□□□□□ -0.2
IGHV4-28A0A0C4DH34 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC13.81□□□□□ -0.2
IGHV4-28A0A0C4DH34 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC13.81□□□□□ -0.2
IGHV4-28A0A0C4DH34 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
IGHV4-28A0A0C4DH34 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC13.81□□□□□ -0.2
IGHV4-28A0A0C4DH34 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
IGHV4-28A0A0C4DH34 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
IGHV4-28A0A0C4DH34 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC13.81□□□□□ -0.2
IGHV4-28A0A0C4DH34 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC13.81□□□□□ -0.2
IGHV4-28A0A0C4DH34 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
IGHV4-28A0A0C4DH34 KRT18P22-201ENST00000402024 1347 ntBASIC13.81□□□□□ -0.2
IGHV4-28A0A0C4DH34 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC13.81□□□□□ -0.2
IGHV4-28A0A0C4DH34 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC13.81□□□□□ -0.2
IGHV4-28A0A0C4DH34 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC13.81□□□□□ -0.2
IGHV4-28A0A0C4DH34 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
IGHV4-28A0A0C4DH34 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
IGHV4-28A0A0C4DH34 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
IGHV4-28A0A0C4DH34 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
IGHV4-28A0A0C4DH34 TREX1-205ENST00000625293 1783 ntBASIC13.81□□□□□ -0.2
IGHV4-28A0A0C4DH34 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
IGHV4-28A0A0C4DH34 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
IGHV4-28A0A0C4DH34 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC13.8□□□□□ -0.2
IGHV4-28A0A0C4DH34 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
IGHV4-28A0A0C4DH34 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
IGHV4-28A0A0C4DH34 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
IGHV4-28A0A0C4DH34 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC13.8□□□□□ -0.2
IGHV4-28A0A0C4DH34 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
IGHV4-28A0A0C4DH34 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
IGHV4-28A0A0C4DH34 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
IGHV4-28A0A0C4DH34 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
IGHV4-28A0A0C4DH34 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC13.8□□□□□ -0.2
IGHV4-28A0A0C4DH34 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC13.8□□□□□ -0.2
IGHV4-28A0A0C4DH34 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
IGHV4-28A0A0C4DH34 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
IGHV4-28A0A0C4DH34 HIST1H2APS4-201ENST00000362070 348 ntBASIC13.8□□□□□ -0.2
IGHV4-28A0A0C4DH34 CRAT-202ENST00000393384 973 ntTSL 2 BASIC13.8□□□□□ -0.2
IGHV4-28A0A0C4DH34 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC13.8□□□□□ -0.2
IGHV4-28A0A0C4DH34 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
IGHV4-28A0A0C4DH34 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
IGHV4-28A0A0C4DH34 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC13.8□□□□□ -0.2
IGHV4-28A0A0C4DH34 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
IGHV4-28A0A0C4DH34 KRT18P21-201ENST00000515767 1272 ntBASIC13.8□□□□□ -0.2
IGHV4-28A0A0C4DH34 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC13.8□□□□□ -0.2
IGHV4-28A0A0C4DH34 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms