Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.45■□□□□ 0.22
TRAV18A0A075B6X5 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.45■□□□□ 0.22
TRAV18A0A075B6X5 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV18A0A075B6X5 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV18A0A075B6X5 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAV18A0A075B6X5 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TRAV18A0A075B6X5 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV18A0A075B6X5 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV18A0A075B6X5 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC16.45■□□□□ 0.22
TRAV18A0A075B6X5 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAV18A0A075B6X5 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV18A0A075B6X5 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TRAV18A0A075B6X5 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAV18A0A075B6X5 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV18A0A075B6X5 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV18A0A075B6X5 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
TRAV18A0A075B6X5 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.45■□□□□ 0.22
TRAV18A0A075B6X5 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV18A0A075B6X5 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV18A0A075B6X5 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAV18A0A075B6X5 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV18A0A075B6X5 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV18A0A075B6X5 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV18A0A075B6X5 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV18A0A075B6X5 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV18A0A075B6X5 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV18A0A075B6X5 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV18A0A075B6X5 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV18A0A075B6X5 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAV18A0A075B6X5 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV18A0A075B6X5 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV18A0A075B6X5 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV18A0A075B6X5 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV18A0A075B6X5 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV18A0A075B6X5 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.44■□□□□ 0.22
TRAV18A0A075B6X5 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV18A0A075B6X5 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV18A0A075B6X5 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
TRAV18A0A075B6X5 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
TRAV18A0A075B6X5 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TRAV18A0A075B6X5 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TRAV18A0A075B6X5 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.44■□□□□ 0.22
TRAV18A0A075B6X5 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
TRAV18A0A075B6X5 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV18A0A075B6X5 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV18A0A075B6X5 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV18A0A075B6X5 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV18A0A075B6X5 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV18A0A075B6X5 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAV18A0A075B6X5 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAV18A0A075B6X5 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC16.44■□□□□ 0.22
TRAV18A0A075B6X5 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC16.44■□□□□ 0.22
TRAV18A0A075B6X5 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
TRAV18A0A075B6X5 SDHAP1-207ENST00000440850 2000 ntBASIC16.44■□□□□ 0.22
TRAV18A0A075B6X5 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.44■□□□□ 0.22
TRAV18A0A075B6X5 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV18A0A075B6X5 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.44■□□□□ 0.22
TRAV18A0A075B6X5 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TRAV18A0A075B6X5 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV18A0A075B6X5 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV18A0A075B6X5 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV18A0A075B6X5 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
TRAV18A0A075B6X5 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TRAV18A0A075B6X5 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV18A0A075B6X5 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC16.44■□□□□ 0.22
TRAV18A0A075B6X5 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV18A0A075B6X5 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.44■□□□□ 0.22
TRAV18A0A075B6X5 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC16.44■□□□□ 0.22
TRAV18A0A075B6X5 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.44■□□□□ 0.22
TRAV18A0A075B6X5 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
TRAV18A0A075B6X5 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV18A0A075B6X5 TFP1-202ENST00000475455 1573 ntBASIC16.43■□□□□ 0.22
TRAV18A0A075B6X5 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV18A0A075B6X5 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TRAV18A0A075B6X5 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV18A0A075B6X5 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV18A0A075B6X5 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV18A0A075B6X5 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.43■□□□□ 0.22
TRAV18A0A075B6X5 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAV18A0A075B6X5 SPI1-203ENST00000533030 661 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAV18A0A075B6X5 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAV18A0A075B6X5 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC16.43■□□□□ 0.22
TRAV18A0A075B6X5 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV18A0A075B6X5 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV18A0A075B6X5 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TRAV18A0A075B6X5 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV18A0A075B6X5 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV18A0A075B6X5 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAV18A0A075B6X5 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.43■□□□□ 0.22
TRAV18A0A075B6X5 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV18A0A075B6X5 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAV18A0A075B6X5 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV18A0A075B6X5 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV18A0A075B6X5 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
TRAV18A0A075B6X5 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.43■□□□□ 0.22
TRAV18A0A075B6X5 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV18A0A075B6X5 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.42■□□□□ 0.22
TRAV18A0A075B6X5 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TRAV18A0A075B6X5 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV18A0A075B6X5 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms